DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3065 and sptf-2

DIOPT Version :10

Sequence 1:NP_611861.1 Gene:CG3065 / 37818 FlyBaseID:FBgn0034946 Length:400 Species:Drosophila melanogaster
Sequence 2:NP_495833.1 Gene:sptf-2 / 188733 WormBaseID:WBGene00011926 Length:166 Species:Caenorhabditis elegans


Alignment Length:81 Identity:45/81 - (55%)
Similarity:55/81 - (67%) Gaps:0/81 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 VCPYDNCTKSYGKSSHLRSHLTWHTGIKPFVCSEPKCGKGFTRSDELNRHLRTHTGEKPFECIQC 174
            :|....|.|:|.|:||||:||..|||.:||||....|||.|.|||:|.||.||||.|..|.|..|
 Worm    78 LCSVPGCGKTYKKTSHLRAHLRKHTGDRPFVCDWFDCGKRFDRSDQLIRHKRTHTKEYRFACKFC 142

  Fly   175 TKKFSRSDHLTKHLAT 190
            .::|||||||.:||.:
 Worm   143 IRQFSRSDHLQQHLTS 158

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3065NP_611861.1 COG5048 99..>400 CDD:227381 45/81 (56%)
C2H2 Zn finger 111..133 CDD:275368 11/21 (52%)
C2H2 Zn finger 141..163 CDD:275368 12/21 (57%)
C2H2 Zn finger 171..191 CDD:275368 11/20 (55%)
C2H2 Zn finger 348..368 CDD:275368
C2H2 Zn finger 376..396 CDD:275368
sptf-2NP_495833.1 zf-C2H2_8 79..156 CDD:464935 43/76 (57%)
C2H2 Zn finger 82..101 CDD:275368 10/18 (56%)
C2H2 Zn finger 109..131 CDD:275368 12/21 (57%)
C2H2 Zn finger 139..156 CDD:275368 9/16 (56%)
Blue background indicates that the domain is not in the aligned region.

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