DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3065 and LOC1270064

DIOPT Version :10

Sequence 1:NP_611861.1 Gene:CG3065 / 37818 FlyBaseID:FBgn0034946 Length:400 Species:Drosophila melanogaster
Sequence 2:XP_061498477.1 Gene:LOC1270064 / 1270064 VectorBaseID:AGAMI1_007152 Length:469 Species:Anopheles gambiae


Alignment Length:430 Identity:90/430 - (20%)
Similarity:138/430 - (32%) Gaps:173/430 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly  1760 YVEQQQQQLQ-----------QHSSLPGKNRQKKYSLYEISLNDSGNYGSPRNLAEFRQ--GFY- 1810
            :|.:.:.||:           |:|||    :|.|::....||::  ||.:....|....  .|| 
Mosquito  1551 FVIKAESQLRGPPFLSSNGSSQNSSL----KQAKFNTSRSSLDE--NYCTTTTTANVNSPLSFYT 1609

  Fly  1811 -------RDSGISTSTQELNNL--------NAASSSGATGGGP-------LPQGGEGCAQTPPHQ 1853
                   .|..:|.|   ::|.        :.|||:|..||.|       |...|...:..|   
Mosquito  1610 NHDKEKENDCAVSLS---MSNAGVSAAAVGSLASSAGVVGGAPPLQSKVGLDMSGAQGSGVP--- 1668

  Fly  1854 HYHQPMTITSAATTSHDDYNIIANGNTLPVMSQHPVRGHQKTNSNPEAYQSIPMVAGTTAPST-- 1916
               .|:||.|.|...    .:.|:|||...:      |.::|.|              .|||.  
Mosquito  1669 ---LPLTIISTAPRC----QVAADGNTESFL------GDRQTLS--------------VAPSPDT 1706

  Fly  1917 -------GGTSVQPPPPPIPPKSASLHHQHSLPVG---SLGGGGLANNNINNNNNNHSNNNSTLS 1971
                   |||:               :..:::.:|   .:|.|||..          |....|| 
Mosquito  1707 RCCAILGGGTA---------------YDAYTMGMGMGMGMGMGGLTG----------SLGRRTL- 1745

  Fly  1972 FHSQ------------------------------GAHAQHLPP----PSHYHHQRNQSLNLSTNS 2002
             |.|                              |.|...:.|    .|||       :.|..|.
Mosquito  1746 -HQQPTHFRQGACGEFVGVETLDILQGVAADSIIGIHTSAIMPTATSTSHY-------VPLQHNP 1802

  Fly  2003 SSDGEQLSLNDISPAPPPMFNDNFSDSFSDECDNPAPSCGSVPISQHAKMTPSPGRSVGGGGSGA 2067
            ..|....|| .:|.||||..:.|.|.:    .....|:..::|.......||...:.|       
Mosquito  1803 YVDFVPSSL-ILSMAPPPTISGNLSGT----AMQTMPAIPTIPTMSLPTQTPKTQKRV------- 1855

  Fly  2068 AGAGVVVTPGGYNSSTLNGSASSGEALELSSITTTTTTTT 2107
                .::.|  .:.:|.:....:..|..:|:.|.|:|.||
Mosquito  1856 ----TILEP--TSRTTFDPLLPTMVAAVVSTSTVTSTATT 1889

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3065NP_611861.1 COG5048 99..>400 CDD:227381
C2H2 Zn finger 111..133 CDD:275368
C2H2 Zn finger 141..163 CDD:275368
C2H2 Zn finger 171..191 CDD:275368
C2H2 Zn finger 348..368 CDD:275368
C2H2 Zn finger 376..396 CDD:275368
LOC1270064XP_061498477.1 None
Blue background indicates that the domain is not in the aligned region.

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