DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3065 and klf3

DIOPT Version :10

Sequence 1:NP_611861.1 Gene:CG3065 / 37818 FlyBaseID:FBgn0034946 Length:400 Species:Drosophila melanogaster
Sequence 2:NP_571934.3 Gene:klf3 / 117603 ZFINID:ZDB-GENE-011116-1 Length:328 Species:Danio rerio


Alignment Length:216 Identity:71/216 - (32%)
Similarity:99/216 - (45%) Gaps:40/216 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSQVI-PNTPTPQMLTTSTPIEPMKPPPAFPTMSGANIHEQASDMILRASTIFEDVKHDEANV-- 62
            ::||: |...:|.|:    |:.||.....:|    .::|...| :|:...|..:...|...:|  
Zfish   125 VTQVLTPFVSSPGMI----PVIPMPLSVLYP----PSLHLSPS-IIISPVTPEDPANHKHFSVIK 180

  Fly    63 -ENVPHH-----GVETEPE----DDSH------------YGGNGNSKIRIMPSVKLMATTLASDP 105
             ||...|     .:::||.    .|:|            |...||::...:.|..|:      ..
Zfish   181 SENTSDHHELLKPIKSEPHPEHTQDNHSQEKSVITALPNYNDRGNTQSPKVESPDLL------KK 239

  Fly   106 KRKFVCPYDNCTKSYGKSSHLRSHLTWHTGIKPFVCSEPKCGKGFTRSDELNRHLRTHTGEKPFE 170
            :|...|.::.|.|.|.|||||::|...|||.||:.|....|...|.|||||.||.|.|||.|||.
Zfish   240 RRIHRCDFNGCNKVYTKSSHLKAHRRTHTGEKPYKCMWEGCTWKFARSDELTRHYRKHTGVKPFH 304

  Fly   171 CIQCTKKFSRSDHLTKHLATH 191
            |..|.:.|||||||..|...|
Zfish   305 CPDCDRTFSRSDHLALHKKRH 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3065NP_611861.1 COG5048 99..>400 CDD:227381 44/93 (47%)
C2H2 Zn finger 111..133 CDD:275368 10/21 (48%)
C2H2 Zn finger 141..163 CDD:275368 11/21 (52%)
C2H2 Zn finger 171..191 CDD:275368 10/19 (53%)
C2H2 Zn finger 348..368 CDD:275368
C2H2 Zn finger 376..396 CDD:275368
klf3NP_571934.3 KLF3_N 60..243 CDD:410554 28/132 (21%)
C2H2 Zn finger 248..267 CDD:275368 9/18 (50%)
C2H2 Zn finger 275..297 CDD:275368 11/21 (52%)
zf-H2C2_2 289..314 CDD:463886 14/24 (58%)
C2H2 Zn finger 305..325 CDD:275368 10/19 (53%)
Blue background indicates that the domain is not in the aligned region.

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