DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10904 and CG3919

DIOPT Version :10

Sequence 1:NP_611860.1 Gene:CG10904 / 37817 FlyBaseID:FBgn0034945 Length:266 Species:Drosophila melanogaster
Sequence 2:NP_001261840.1 Gene:CG3919 / 39582 FlyBaseID:FBgn0036423 Length:318 Species:Drosophila melanogaster


Alignment Length:290 Identity:51/290 - (17%)
Similarity:96/290 - (33%) Gaps:91/290 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 AKLIELYRSSDCLWNHYSELYKNKDCRAKAIESICASLEITKHDYGKKVHNLRNQF--------- 85
            ||:..|.:...||::.:.:.|..|.....|.:.|...:..:.....::..|:|:.:         
  Fly    19 AKICHLVKLHPCLYDRHDDNYLRKSTVKNAWKEISNEMRNSVKSCKERWRNIRSSYARSIKLHHG 83

  Fly    86 ------NAELKKLERRLEES-----GGDRDSEKACRWEHFKTLMFLRSVIEPRPGYQQGAPGKKL 139
                  |:|||.|::.:...     .|.|...|. :.||                 .:|.|...:
  Fly    84 ANTYYLNSELKFLQKHITPGVPVPLRGRRSRPKG-QEEH-----------------DEGDPETPV 130

  Fly   140 VSKLDMCYPDQ-------------------DVE----KQSQSSIESLESMI----------IEND 171
            .:.|:|.:...                   |||    ....|||...|..:          .|.:
  Fly   131 EAILEMVHSPSFLNSEHAQSRHSTDPASATDVEATQFNNEPSSIMDFEDTVPAEMRTESDSSEKE 195

  Fly   172 AEICQPPKVSEPIPPMPPEPAPSSKFVDPNRTVEAPAAPSPFHLPLSGRDQWDAFGELIASEFRN 236
            |::.:......|:...|.         ...|.:||        ||:...|  |||.:.:..|.::
  Fly   196 AKVGEITLYRVPLLEFPK---------TSTRCIEA--------LPIMDFD--DAFLQGLRPEIKH 241

  Fly   237 LNSEVSRKRLKRKIMQVMLEVGEEDDLTNS 266
            :|.. .:...||::..::.|:...:...:|
  Fly   242 MNFH-QKLYFKRRVYDLLGEIFHSEQSASS 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10904NP_611860.1 MADF 31..125 CDD:214738 20/113 (18%)
CG3919NP_001261840.1 MADF 20..100 CDD:214738 15/79 (19%)
BESS 226..260 CDD:460758 8/36 (22%)

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