DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10904 and hng1

DIOPT Version :10

Sequence 1:NP_611860.1 Gene:CG10904 / 37817 FlyBaseID:FBgn0034945 Length:266 Species:Drosophila melanogaster
Sequence 2:NP_611558.2 Gene:hng1 / 37412 FlyBaseID:FBgn0034599 Length:315 Species:Drosophila melanogaster


Alignment Length:306 Identity:66/306 - (21%)
Similarity:116/306 - (37%) Gaps:85/306 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KSEELGETQLT--KRQRRKQTIWTREKIAKLIEL-----YRSSDCLWNHYSELYKNKDCRAKAIE 61
            ::..|.:.||.  :..:||:..|.  |:|.|:.:     .|...||.:.||...|.|        
  Fly    21 ETPSLYDPQLPSFRLSQRKEEDWA--KVADLLNISISDARRRWTCLRDRYSRELKQK-------- 75

  Fly    62 SICASLEITKHDYGKKVHNLRNQFNAELKKLERRLEESGGDRDSE-KACRW--------EHFKTL 117
            .:..|.|...:|:.:|:..||:       .:.:|.|..|.:||.| |...|        ...:..
  Fly    76 RLHPSGEFGHNDFFRKMDFLRD-------FVRKRRERRGRERDREQKPTGWMKVDLQRRRRTRLP 133

  Fly   118 MFLRSVIEPR--PGYQQGAPGKKLVSKLDMCYPDQDVEKQSQSSIESLESMIIE----------- 169
            :...::||.:  ..|.:|..           ..|.|.:.:|.::.....|:::|           
  Fly   134 IDTETLIEEQGSHAYDEGEE-----------QHDYDAKLESHTTQSETYSVVVEADDGQEPEQES 187

  Fly   170 -----NDAEICQP--------PKVSEPIPPMPPEPAPSSK-------FVDPNRTVE----APAAP 210
                 .||| |:.        |:::.|.....|||..|:.       .:.||...|    ||..|
  Fly   188 FDEFLGDAE-CEQKVKVVTIHPEIAAPNATSAPEPIESNHADLNYLVCMPPNANQEREHSAPELP 251

  Fly   211 SPFHL--PLSGRDQWDAFGELIASEFRNLNSEVSRKRLKRKIMQVM 254
            :|..:  ..:...:.|.|.:.||:..|.| |.|.:.:.|.::.|::
  Fly   252 NPTAVITQKTCETEDDFFCKSIAAYLRQL-SRVHKIKAKVEMYQIL 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10904NP_611860.1 MADF 31..125 CDD:214738 22/107 (21%)
hng1NP_611558.2 MADF 15..98 CDD:214738 22/93 (24%)
BESS 264..298 CDD:460758 10/34 (29%)

Return to query results.
Submit another query.