DRSC/TRiP Functional Genomics Resources

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Protein Alignment Alas and SPTLC2

DIOPT Version :9

Sequence 1:NP_477281.1 Gene:Alas / 37815 FlyBaseID:FBgn0020764 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_004854.1 Gene:SPTLC2 / 9517 HGNCID:11278 Length:562 Species:Homo sapiens


Alignment Length:444 Identity:124/444 - (27%)
Similarity:211/444 - (47%) Gaps:51/444 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 YERFFNEQIMKKKRDHSYRVFKKV--------NRLAGDGLFPHALEYSERTEKPITVWCSNDYLG 151
            :|.|:...:..:.||:..|....|        .|.:.|  :..:.:|:....|.:....|.:|||
Human   118 FENFYTRNLYMRIRDNWNRPICSVPGARVDIMERQSHD--YNWSFKYTGNIIKGVINMGSYNYLG 180

  Fly   152 MSAHPG-VKRAVQDALNRHGSGAGGTRNISGNSLHHERLESKLAELHQKEAALLFTSCFVANDST 215
            .:.:.| .:.|....|..:|:|...||...||...||.||..:|.....|||:.:...|..|...
Human   181 FARNTGSCQEAAAKVLEEYGAGVCSTRQEIGNLDKHEELEELVARFLGVEAAMAYGMGFATNSMN 245

  Fly   216 LFTLAKLLPGCEIFSDAGNHASMIMGIRNSGVPKHIFRHNDVDHLHQLLK--------QTDKSVP 272
            :..|..  .||.|.||..||||:::|.|.||....||:||::..|.:|||        :|.:...
Human   246 IPALVG--KGCLILSDELNHASLVLGARLSGATIRIFKHNNMQSLEKLLKDAIVYGQPRTRRPWK 308

  Fly   273 KI-VAFETVHSMTGAICPLEELLDVAHEHGAITFIDEVHAVGLYGDHGAGVGERDGV-LHKMDII 335
            || :..|.::||.|:|..|.|::.:..::.|..::||.|::|..|..|.||.|..|: ...:|::
Human   309 KILILVEGIYSMEGSIVRLPEVIALKKKYKAYLYLDEAHSIGALGPTGRGVVEYFGLDPEDVDVM 373

  Fly   336 SGTLGKAFGNIGGYIAGTHNLVDMIRSYAAGFIFTTSLPPTVLCGALEAVNILASEEGRQL-RHL 399
            .||..|:||..||||.|...|:|.:|:::...::.|||.|.|:...:.::..:..::|..| :..
Human   374 MGTFTKSFGASGGYIGGKKELIDYLRTHSHSAVYATSLSPPVVEQIITSMKCIMGQDGTSLGKEC 438

  Fly   400 HQR---NVSYLKSLLKREGFPV---EETPSHIIPIKIGDPLKSSQISNVLIEQFGHYLQSINYPT 458
            .|:   |..|.:..||..||.:   |::|  ::|:.:..|.|        |..||..:...|...
Human   439 VQQLAENTRYFRRRLKEMGFIIYGNEDSP--VVPLMLYMPAK--------IGAFGREMLKRNIGV 493

  Fly   459 VARG-------QEKLRLAPTPFHTFEMMNALVTDLKKVWEMVDLSTN----VPL 501
            |..|       :.:.|...:..||.|:::..:.::.:|.:::.|..:    |||
Human   494 VVVGFPATPIIESRARFCLSAAHTKEILDTALKEIDEVGDLLQLKYSRHRLVPL 547

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AlasNP_477281.1 AAT_I 93..495 CDD:302748 120/432 (28%)
BioF 95..490 CDD:223234 119/427 (28%)
SPTLC2NP_004854.1 AAT_I 67..542 CDD:418510 121/437 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0156
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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