DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Alas and HEM1

DIOPT Version :9

Sequence 1:NP_477281.1 Gene:Alas / 37815 FlyBaseID:FBgn0020764 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_010518.1 Gene:HEM1 / 851818 SGDID:S000002640 Length:548 Species:Saccharomyces cerevisiae


Alignment Length:538 Identity:222/538 - (41%)
Similarity:323/538 - (60%) Gaps:48/538 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 VSGEKKLSLVAASVTRSHSTGANAHANAGGPATANATAP---VSAPASADPGKASAKETFPYERF 98
            ||...:||..||    .|:....|.|...|.|.|.|||.   .:|.|:|....::.:..|.||..
Yeast    16 VSTLNRLSTTAA----PHAKNGYATATGAGAAAATATASSTHAAAAAAAAANHSTQESGFDYEGL 76

  Fly    99 FNEQIMKKKRDHSYRVFKKVNRLAGDGLFPHALEYSERTEKPITVWCSNDYLGMSAHPGVKRAVQ 163
            .:.::.||:.|.|||.|..:||||.:  ||  |.:.:|....:|||||||||.:|.||.|..|:.
Yeast    77 IDSELQKKRLDKSYRYFNNINRLAKE--FP--LAHRQREADKVTVWCSNDYLALSKHPEVLDAMH 137

  Fly   164 DALNRHGSGAGGTRNISGNSLHHERLESKLAELHQKEAALLFTSCFVANDSTLFTLAKLLPGCEI 228
            ..::::|.||||||||:|:::....||::||.||:||.||:|:||:||||:.|..|.:.:....|
Yeast   138 KTIDKYGCGAGGTRNIAGHNIPTLNLEAELATLHKKEGALVFSSCYVANDAVLSLLGQKMKDLVI 202

  Fly   229 FSDAGNHASMIMGIRNSGVPKHIFRHNDVDHLHQLLKQTDKSVPKIVAFETVHSMTGAICPLEEL 293
            |||..||||||:||:::.|.||||:|||::.|.|||:...|||||::|||:|:||.|::..:|::
Yeast   203 FSDELNHASMIVGIKHANVKKHIFKHNDLNELEQLLQSYPKSVPKLIAFESVYSMAGSVADIEKI 267

  Fly   294 LDVAHEHGAITFIDEVHAVGLYGDHGAGVGE-------------------RDG---VLHKMDIIS 336
            .|:|.::||:||:||||||||||.|||||.|                   :.|   |:.::|:|:
Yeast   268 CDLADKYGALTFLDEVHAVGLYGPHGAGVAEHCDFESHRASGIATPKTNDKGGAKTVMDRVDMIT 332

  Fly   337 GTLGKAFGNIGGYIAGTHNLVDMIRSYAAGFIFTTSLPPTVLCGALEAVNILASEEGRQLRHLHQ 401
            |||||:||::|||:|.:..|:|..||:|.||||||:|||:|:.||..|:......  ..||...|
Yeast   333 GTLGKSFGSVGGYVAASRKLIDWFRSFAPGFIFTTTLPPSVMAGATAAIRYQRCH--IDLRTSQQ 395

  Fly   402 RNVSYLKSLLKREGFPVEETPSHIIPIKIGDPLKSSQISNVLIEQFGHYLQSINYPTVARGQEKL 466
            ::..|:|......|.||...||||:|:.||:...:.|.|::||.:...|:|:||:||||||.|:|
Yeast   396 KHTMYVKKAFHELGIPVIPNPSHIVPVLIGNADLAKQASDILINKHQIYVQAINFPTVARGTERL 460

  Fly   467 RLAPTPFHTFEMMNALVTDLKKVWEMVDL-------STNVPLSPNACMFCNSESCWHQD----TS 520
            |:.|||.||.::.:.|:..:..|:..:.|       |....|......|....:.|...    |:
Yeast   461 RITPTPGHTNDLSDILINAVDDVFNELQLPRVRDWESQGGLLGVGESGFVEESNLWTSSQLSLTN 525

  Fly   521 PDLECGI--PNCPRLEIS 536
            .||...:  |...:||:|
Yeast   526 DDLNPNVRDPIVKQLEVS 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AlasNP_477281.1 AAT_I 93..495 CDD:302748 192/423 (45%)
BioF 95..490 CDD:223234 190/416 (46%)
HEM1NP_010518.1 5aminolev_synth 71..492 CDD:273820 193/426 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157345502
Domainoid 1 1.000 349 1.000 Domainoid score I144
eggNOG 1 0.900 - - E1_COG0156
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H17
Inparanoid 1 1.050 393 1.000 Inparanoid score I324
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG58214
OrthoFinder 1 1.000 - - FOG0000902
OrthoInspector 1 1.000 - - oto99543
orthoMCL 1 0.900 - - OOG6_100359
Panther 1 1.100 - - LDO PTHR13693
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R554
SonicParanoid 1 1.000 - - X1924
TreeFam 1 0.960 - -
1514.790

Return to query results.
Submit another query.