DRSC/TRiP Functional Genomics Resources

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Protein Alignment Alas and SPT1

DIOPT Version :10

Sequence 1:NP_477281.1 Gene:Alas / 37815 FlyBaseID:FBgn0020764 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_190447.1 Gene:SPT1 / 824039 AraportID:AT3G48780 Length:489 Species:Arabidopsis thaliana


Alignment Length:400 Identity:108/400 - (27%)
Similarity:192/400 - (48%) Gaps:47/400 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 ERTEKPITVWCSN----DYLGMSAH-----PGVKRAVQDALNRHGSGAGGTRNISGNSLHHERLE 190
            :||.|  |..|.|    :|||..:.     |    .|.::|.:..:....:|..:|.:..|..||
plant    94 KRTTK--TSRCLNLGSYNYLGFGSFDEYCTP----RVIESLKKFSASTCSSRVDAGTTSVHAELE 152

  Fly   191 SKLAELHQKEAALLFTSCFVANDSTLFTLAKLLPGCEIFSDAGNHASMIMGIRNSGVPKHIFRHN 255
            ..:|:...:.||::|...:..|.:.:..|  :..|..|.||:.||.|::.|.|.||....:|:||
plant   153 DCVAKYVGQPAAVIFGMGYATNSAIIPVL--IGKGGLIISDSLNHTSIVNGARGSGATIRVFQHN 215

  Fly   256 DVDHLHQLLK-QTDKSVPK--------IVAFETVHSMTGAICPLEELLDVAHEHGAITFIDEVHA 311
            ...||.::|| |..:..|:        ||..|.::||.|.||.|.|::.:..::.|..::||.|:
plant   216 TPGHLEKVLKEQIAEGQPRTHRPWKKIIVVVEGIYSMEGEICHLPEIVSICKKYKAYVYLDEAHS 280

  Fly   312 VGLYGDHGAGVGERDGV-LHKMDIISGTLGKAFGNIGGYIAGTHNLVDMIRSYAAGFIFTTSLPP 375
            :|..|..|.||.|..|| ...:||:.||..|:||:.||||||:.:|:..::......::.||:..
plant   281 IGAIGKTGRGVCELLGVDTSDVDIMMGTFTKSFGSCGGYIAGSKDLIQYLKHQCPAHLYATSIST 345

  Fly   376 TVLCGALEAVNILASEEG-----RQLRHLHQRNVSYLKSLLKREGFPV-EETPSHIIPIKIGDPL 434
            ......:.|:.::..|:|     ::|..:.: |.::.::.|::.||.| .:..|.::||.:.:|.
plant   346 PSATQIISAIKVILGEDGSNRGAQKLARIRE-NSNFFRAELQKMGFEVLGDNDSPVMPIMLYNPA 409

  Fly   435 KSSQISNVLIEQFGHYLQSINYPTVARGQEKLRLAPTPFHTFEMMNALVTDLKKVWEMV----DL 495
            |....|...:.: ...:..:.:|.......:.|:..:..|:.|       ||.|..:::    ||
plant   410 KIPAFSRECLRE-NLAVVVVGFPATPLLLARARICISASHSRE-------DLIKALQVISKAGDL 466

  Fly   496 STNVPLSPNA 505
             |.:...|.|
plant   467 -TGIKYFPAA 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AlasNP_477281.1 AAT_I 93..495 CDD:450240 103/388 (27%)
SPT1NP_190447.1 PLN02483 1..489 CDD:178101 107/399 (27%)

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