DRSC/TRiP Functional Genomics Resources

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Protein Alignment Alas and alas1

DIOPT Version :9

Sequence 1:NP_477281.1 Gene:Alas / 37815 FlyBaseID:FBgn0020764 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_958444.1 Gene:alas1 / 64608 ZFINID:ZDB-GENE-001229-2 Length:613 Species:Danio rerio


Alignment Length:591 Identity:290/591 - (49%)
Similarity:371/591 - (62%) Gaps:92/591 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQCPFLNRFTASFIRNYAETLCQSYGSHCPVV----GKTLVSGEKKLSLVAASVTRSHSTGANAH 61
            ::||||:|...:|::...::|. :|...|||:    .:.|:   :.|...:||..:...:.:..|
Zfish     5 IRCPFLSRVPQTFLQQARKSLV-AYAVKCPVMMDLASRPLL---RPLCSSSASFQKVEDSSSAGH 65

  Fly    62 ANAGGPAT-ANATAPVSAPASADPGKASAKE---------------------------------- 91
            ..:..||. |...||.:..|||......|.|                                  
Zfish    66 EASDAPAVPAGHPAPPAGHASASKCPFLAAEMSQKNSGVVRQASMALQEDVSEVRTVQKDVSASA 130

  Fly    92 --------------------------------------TFPYERFFNEQIMKKKRDHSYRVFKKV 118
                                                  :|.|:.||.::|.:||.||:|||||.|
Zfish   131 LTPLKDGMNGGNLMKKLMKQRPAHVSHLLQDNMPKNVSSFRYDEFFEKKIEEKKSDHTYRVFKTV 195

  Fly   119 NRLAGDGLFPHALEYSERT--EKPITVWCSNDYLGMSAHPGVKRAVQDALNRHGSGAGGTRNISG 181
            ||.|.:  ||.|.:|:|..  ::.::|||||||||||.||.|.:.:.|.|.:|||||||||||||
Zfish   196 NRRATE--FPMADDYTESLSFKRNVSVWCSNDYLGMSRHPRVVQTIMDTLGKHGSGAGGTRNISG 258

  Fly   182 NSLHHERLESKLAELHQKEAALLFTSCFVANDSTLFTLAKLLPGCEIFSDAGNHASMIMGIRNSG 246
            .|..|..||.:||:||.|:|||||||||||||||||||||::|||||:||||||||||.||||||
Zfish   259 TSKFHVDLEHELADLHGKDAALLFTSCFVANDSTLFTLAKMMPGCEIYSDAGNHASMIQGIRNSG 323

  Fly   247 VPKHIFRHNDVDHLHQLLKQTDKSVPKIVAFETVHSMTGAICPLEELLDVAHEHGAITFIDEVHA 311
            ..|.||||||..||.:||:::|.|.||||||||||||.||:||||:|.|||||.||:||:|||||
Zfish   324 AKKFIFRHNDAKHLRELLEKSDPSTPKIVAFETVHSMDGAVCPLEQLCDVAHEFGAVTFVDEVHA 388

  Fly   312 VGLYGDHGAGVGERDGVLHKMDIISGTLGKAFGNIGGYIAGTHNLVDMIRSYAAGFIFTTSLPPT 376
            |||||..|.|:|:||.|:|||||||||||||||.:|||||.||.|||.:|||||||||||||||.
Zfish   389 VGLYGPRGGGIGDRDSVMHKMDIISGTLGKAFGCVGGYIASTHALVDTVRSYAAGFIFTTSLPPM 453

  Fly   377 VLCGALEAVNILASEEGRQLRHLHQRNVSYLKSLLKREGFPVEETPSHIIPIKIGDPLKSSQISN 441
            :|.||.::|.||.|||||.||..|||||:.|:.:|...|.||...||||||:::.|..|::::.:
Zfish   454 LLSGARQSVQILKSEEGRTLRRKHQRNVTLLRQMLMDSGLPVIHCPSHIIPVRVADAEKNTEVCD 518

  Fly   442 VLIEQFGHYLQSINYPTVARGQEKLRLAPTPFHTFEMMNALVTDLKKVWEMVDLSTNVPLSPNA- 505
            :::.::..|:|:|||||||||:|.||:||||.||.:||...|..|.:.|..|.|    ||.|:: 
Zfish   519 IMMSRYNIYVQAINYPTVARGEELLRIAPTPHHTPQMMKYFVDKLTQTWTEVGL----PLKPHSS 579

  Fly   506 --CMFC 509
              |.||
Zfish   580 AECNFC 585

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AlasNP_477281.1 AAT_I 93..495 CDD:302748 257/403 (64%)
BioF 95..490 CDD:223234 254/396 (64%)
alas1NP_958444.1 Preseq_ALAS 4..120 CDD:286162 26/118 (22%)
AAT_I 170..575 CDD:302748 259/410 (63%)
BioF 170..567 CDD:223234 255/398 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 488 1.000 Domainoid score I370
eggNOG 1 0.900 - - E1_COG0156
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 571 1.000 Inparanoid score I1024
OMA 1 1.010 - - QHG58214
OrthoDB 1 1.010 - - D306770at33208
OrthoFinder 1 1.000 - - FOG0000902
OrthoInspector 1 1.000 - - otm25920
orthoMCL 1 0.900 - - OOG6_100359
Panther 1 1.100 - - LDO PTHR13693
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R554
SonicParanoid 1 1.000 - - X1924
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.870

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