DRSC/TRiP Functional Genomics Resources

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Protein Alignment Alas and alas2

DIOPT Version :9

Sequence 1:NP_477281.1 Gene:Alas / 37815 FlyBaseID:FBgn0020764 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_571757.1 Gene:alas2 / 64607 ZFINID:ZDB-GENE-001229-1 Length:583 Species:Danio rerio


Alignment Length:604 Identity:298/604 - (49%)
Similarity:375/604 - (62%) Gaps:96/604 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 CPFLNRFTASFIRNYAETLCQSYGSHCPVV-----GKTLVSGEK--------------------- 41
            ||||........|..|..|  :....||::     .|...|.|:                     
Zfish     8 CPFLKSSPGPSARKVATYL--NLADRCPIIVRQISAKAAQSSEQNGLLPHKEPKRQLATTATQVA 70

  Fly    42 ------------KLSLVAAS------------------VTRSHSTGANAHANAGGPA---TANAT 73
                        |:.||.||                  :..|..:|..:|.:. ||.   ..|..
Zfish    71 VSMSQSCPFVSSKIGLVKASPQVQEDVQPNLENQDTSGLISSLFSGLQSHQST-GPTHLLQDNFN 134

  Fly    74 APVSAPASADPGKASAKETFPYERFFNEQIMKKKRDHSYRVFKKVNRLAGDGLFPHALEYS--ER 136
            .|                ||.|:.||.::|::||:||:||:||.|||.|  .:||.|.:||  .|
Zfish   135 RP----------------TFSYDEFFTQKIVEKKKDHTYRIFKTVNRFA--EVFPFAEDYSIAGR 181

  Fly   137 TEKPITVWCSNDYLGMSAHPGVKRAVQDALNRHGSGAGGTRNISGNSLHHERLESKLAELHQKEA 201
            ....::|||||||||||.||.|.:|:.|||.:||:||||||||||.|.:|..||::||.||||:.
Zfish   182 LGSQVSVWCSNDYLGMSRHPRVVKAIGDALKKHGAGAGGTRNISGTSNYHVALENELARLHQKDG 246

  Fly   202 ALLFTSCFVANDSTLFTLAKLLPGCEIFSDAGNHASMIMGIRNSGVPKHIFRHNDVDHLHQLLKQ 266
            ||:|:|||||||||||||||:||||||:||.|||||||.||||||..:.||||||..||.:||.:
Zfish   247 ALVFSSCFVANDSTLFTLAKMLPGCEIYSDMGNHASMIQGIRNSGAKRFIFRHNDASHLEELLSR 311

  Fly   267 TDKSVPKIVAFETVHSMTGAICPLEELLDVAHEHGAITFIDEVHAVGLYGDHGAGVGERDGVLHK 331
            :|...||||||||||||.|||||||||.||||::||:||:||||||||||.|||||||||.|:||
Zfish   312 SDPLTPKIVAFETVHSMDGAICPLEELCDVAHKYGALTFVDEVHAVGLYGAHGAGVGERDNVMHK 376

  Fly   332 MDIISGTLGKAFGNIGGYIAGTHNLVDMIRSYAAGFIFTTSLPPTVLCGALEAVNILASEEGRQL 396
            :||:|||||||||.:|||||.|..|||.:||:||||||||||||.||.||||:|.:|.|:||:.|
Zfish   377 IDIVSGTLGKAFGCVGGYIASTAALVDTVRSFAAGFIFTTSLPPMVLAGALESVRVLKSDEGQAL 441

  Fly   397 RHLHQRNVSYLKSLLKREGFPVEETPSHIIPIKIGDPLKSSQISNVLIEQFGHYLQSINYPTVAR 461
            |..|||||.:::.||...|.||...|||||||::|:..|:|::.::|:|:...|:|:||||||.|
Zfish   442 RRAHQRNVKHMRQLLLDAGLPVVNCPSHIIPIRVGNAAKNSEVCDILLEKHNIYVQAINYPTVPR 506

  Fly   462 GQEKLRLAPTPFHTFEMMNALVTDLKKVWEMVDLSTNVPLSPNACMFCNSE------SCWHQDTS 520
            |:|.|||||:|||...|||.....|..||:.|.|..|.| :..:|.||:..      |.|.:...
Zfish   507 GEELLRLAPSPFHNPIMMNYFAEKLLDVWQEVGLPLNGP-AQASCTFCDRPLHFDLMSEWEKSYF 570

  Fly   521 PDLECGIPNCPRLEISLAA 539
            .::|      ||. |::||
Zfish   571 GNME------PRY-ITVAA 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AlasNP_477281.1 AAT_I 93..495 CDD:302748 259/403 (64%)
BioF 95..490 CDD:223234 255/396 (64%)
alas2NP_571757.1 Preseq_ALAS 3..98 CDD:286162 17/91 (19%)
AAT_I 138..542 CDD:302748 260/405 (64%)
BioF 138..535 CDD:223234 256/398 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583875
Domainoid 1 1.000 488 1.000 Domainoid score I370
eggNOG 1 0.900 - - E1_COG0156
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H17
Inparanoid 1 1.050 571 1.000 Inparanoid score I1024
OMA 1 1.010 - - QHG58214
OrthoDB 1 1.010 - - D306770at33208
OrthoFinder 1 1.000 - - FOG0000902
OrthoInspector 1 1.000 - - otm25920
orthoMCL 1 0.900 - - OOG6_100359
Panther 1 1.100 - - O PTHR13693
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R554
SonicParanoid 1 1.000 - - X1924
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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