DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Alas and alas1

DIOPT Version :9

Sequence 1:NP_477281.1 Gene:Alas / 37815 FlyBaseID:FBgn0020764 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_001008072.1 Gene:alas1 / 493434 XenbaseID:XB-GENE-975179 Length:628 Species:Xenopus tropicalis


Alignment Length:606 Identity:288/606 - (47%)
Similarity:372/606 - (61%) Gaps:110/606 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 QCPFLNRFTASFIRNYAETLCQSYGSHCPVVGKTLVSGEKKLSLVAASVTRSHS----------- 55
            :||||:|.:.:|::...::|. :|..:|||     :.|.|.||..:.|.:..|.           
 Frog     7 RCPFLSRVSQTFLQKAGKSLV-TYAQNCPV-----MMGTKPLSCASLSTSAVHQQETKETSDSKT 65

  Fly    56 -----------TGANAHANAGGPATANATA----------------------------------- 74
                       ||:...|:..|..:..:.:                                   
 Frog    66 PLNRTQVQGGLTGSQVPADHPGAVSGQSASKCPFLAAQMVQENSSVIRKASPETQEDVQKMQTMR 130

  Fly    75 -PVSAPASADPGKA-----------------------------------SAKETFPYERFFNEQI 103
             .:..|.:...|:|                                   .|.:||.|::||.::|
 Frog   131 KDLRGPITKGAGEAKMTLQKNRSVLEKFQESVLHQRPAVVSHLLQDNMPKAVKTFKYDKFFEKKI 195

  Fly   104 MKKKRDHSYRVFKKVNRLAGDGLFPHALEYSER--TEKPITVWCSNDYLGMSAHPGVKRAVQDAL 166
            .:||.||:|||||.|||.|  .:||.|.:||:.  ::|.::|||||||||||.||.|..||.:.|
 Frog   196 DEKKNDHTYRVFKTVNRRA--EVFPMADDYSDTLISKKTVSVWCSNDYLGMSRHPKVVGAVMETL 258

  Fly   167 NRHGSGAGGTRNISGNSLHHERLESKLAELHQKEAALLFTSCFVANDSTLFTLAKLLPGCEIFSD 231
            .:||:||||||||||.|..|..||.:||:||.|:|||||:|||||||||||||||:||||||:||
 Frog   259 KQHGAGAGGTRNISGTSKFHVELEHELADLHGKDAALLFSSCFVANDSTLFTLAKMLPGCEIYSD 323

  Fly   232 AGNHASMIMGIRNSGVPKHIFRHNDVDHLHQLLKQTDKSVPKIVAFETVHSMTGAICPLEELLDV 296
            ||||||||.|||||..||::||||||.||.:|||.:|.|.||||||||||||.||:|||||:.||
 Frog   324 AGNHASMIQGIRNSRAPKYVFRHNDVGHLRELLKNSDPSTPKIVAFETVHSMDGAVCPLEEMCDV 388

  Fly   297 AHEHGAITFIDEVHAVGLYGDHGAGVGERDGVLHKMDIISGTLGKAFGNIGGYIAGTHNLVDMIR 361
            :||:|||||:||||||||||..|.|:|:||||:.||||||||||||||.:|||||.|..|:|.:|
 Frog   389 SHEYGAITFVDEVHAVGLYGARGGGIGDRDGVMTKMDIISGTLGKAFGCVGGYIASTSALIDTVR 453

  Fly   362 SYAAGFIFTTSLPPTVLCGALEAVNILASEEGRQLRHLHQRNVSYLKSLLKREGFPVEETPSHII 426
            ||||||||||||||.:|.||:.:|.:|.||||:.||..|||||..::.:|...|.||...|||||
 Frog   454 SYAAGFIFTTSLPPMLLSGAIASVRVLKSEEGQALRRQHQRNVKLMRQMLMDSGLPVVHCPSHII 518

  Fly   427 PIKIGDPLKSSQISNVLIEQFGHYLQSINYPTVARGQEKLRLAPTPFHTFEMMNALVTDLKKVWE 491
            ||::.|..|:::|.:.|:..:..|:|:|||||||||:|.||:||||.|..:||:..:..|...|:
 Frog   519 PIRVSDAAKNTEICDKLMRDYNIYVQAINYPTVARGEELLRIAPTPHHNPQMMSYFLDKLLTTWK 583

  Fly   492 MVDLSTNVPLSPN---ACMFC 509
            .|||.    |.|:   .|.||
 Frog   584 SVDLE----LKPHPTAECNFC 600

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AlasNP_477281.1 AAT_I 93..495 CDD:302748 255/403 (63%)
BioF 95..490 CDD:223234 252/396 (64%)
alas1NP_001008072.1 Preseq_ALAS 3..127 CDD:312538 21/125 (17%)
AAT_I 185..590 CDD:327488 257/410 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 491 1.000 Domainoid score I376
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 569 1.000 Inparanoid score I1052
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D306770at33208
OrthoFinder 1 1.000 - - FOG0000902
OrthoInspector 1 1.000 - - otm48434
Panther 1 1.100 - - LDO PTHR13693
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R554
SonicParanoid 1 1.000 - - X1924
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.190

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