DRSC/TRiP Functional Genomics Resources

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Protein Alignment Alas and sptlc3

DIOPT Version :9

Sequence 1:NP_477281.1 Gene:Alas / 37815 FlyBaseID:FBgn0020764 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_001003562.2 Gene:sptlc3 / 445168 ZFINID:ZDB-GENE-041210-281 Length:553 Species:Danio rerio


Alignment Length:427 Identity:121/427 - (28%)
Similarity:213/427 - (49%) Gaps:37/427 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 YERFFNEQIMKKKRDHSYR--------VFKKVNRLAGDGLFPHALEYSERTEKPITVWCSNDYLG 151
            :|.|:...:..:.||:..|        ||..:.|::.|  :......:.||.:.:....|.:|||
Zfish   111 FENFYKRNLYMRVRDNWNRPICSLPGPVFDLMERVSDD--YNWTFRLTGRTIENVINMGSYNYLG 173

  Fly   152 MSA-HPGVKRAVQDALNRHGSGAGGTRNISGNSLHHERLESKLAELHQKEAALLFTSCFVANDST 215
            .:. :....:.|.:...::|.|...||...||...||.||..:|:....|:|:.|...|..|...
Zfish   174 FAENNVDFLKTVAEKTRQYGVGVCSTRQELGNFSIHEELEHLVADFLGVESAMAFGMGFATNSMN 238

  Fly   216 LFTLAKLLPGCEIFSDAGNHASMIMGIRNSGVPKHIFRHNDVDHLHQLLKQ--------TDKSVP 272
            :..|..  .||.|.||..||.|:|:|.|.||....:|:||::..|.:|||:        |.:|..
Zfish   239 IPALVG--KGCLILSDELNHTSLILGARLSGATIRVFKHNNMQSLEKLLKEAICSGQPRTHRSWK 301

  Fly   273 KI-VAFETVHSMTGAICPLEELLDVAHEHGAITFIDEVHAVGLYGDHGAGVGERDGVLHK-MDII 335
            || :..|.::||.|::..|.|::.:..::.|..::||.|::|..|..|.||.|..||..| :|::
Zfish   302 KILIMVEGIYSMEGSLVRLPEIIALKKKYKAYLYLDEAHSIGAVGPTGRGVTEHFGVDPKEIDVL 366

  Fly   336 SGTLGKAFGNIGGYIAGTHNLVDMIRSYAAGFIFTTSLPPTVLCGALEAVNILASEEG-----RQ 395
            .||..|:||..||||||...|||.:|.::...::.|::.|.|:...:.|:..:...:|     |:
Zfish   367 MGTFTKSFGATGGYIAGKKELVDYLRCHSHSAVYATAMSPPVVEQIIRAIKCIMGVDGTTEGQRR 431

  Fly   396 LRHLHQRNVSYLKSLLKREGFPV---EETPSHIIPIKIGDPLKSSQISNVLIE-QFGHYLQSINY 456
            :|.|.: |..|.:|.||..||.:   :::|  :||:.:..|.|....|..::: :.|  :..:.:
Zfish   432 VRQLAE-NTHYFRSRLKEMGFIIYGNKDSP--VIPLLLYQPGKVGAFSRAMLKRKIG--VVVVGF 491

  Fly   457 PTVARGQEKLRLAPTPFHTFEMMNALVTDLKKVWEMV 493
            |.....:.:.|...:..||.:|:|.::..|.::.:.:
Zfish   492 PATTITEARARFCVSAAHTRDMLNKVLQSLDELGDYI 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AlasNP_477281.1 AAT_I 93..495 CDD:302748 121/427 (28%)
BioF 95..490 CDD:223234 121/422 (29%)
sptlc3NP_001003562.2 PLN02483 58..535 CDD:178101 121/427 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0156
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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