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Protein Alignment Alas and Gcat

DIOPT Version :9

Sequence 1:	NP_477281.1	Gene:	Alas / 37815	FlyBaseID:	FBgn0020764	Length:	539	Species:	Drosophila melanogaster
Sequence 2:	NP_038875.3	Gene:	Gcat / 26912	MGIID:	1349389	Length:	416	Species:	Mus musculus

Alignment Length:	385	Identity:	130/385 - (33%)
Similarity:	208/385 - (54%)	Gaps:	26/385 - (6%)

- Green bases have known domain annotations that are detailed below.

  Fly   100 NEQIMKKKRDHSYRVFKKVNRLAGDGLFPHALEYSERTEKPITVWCSNDYLGMSAHPGVKRAVQD 164
            :|:::..::..|.||         ||:....|.:           |:|:|||:|:||.|.:|...
Mouse    43 SERVITSRQGPSIRV---------DGISGGILNF-----------CANNYLGLSSHPAVIQAGLQ 87

  Fly   165 ALNRHGSGAGGTRNISGNSLHHERLESKLAELHQKEAALLFTSCFVANDSTLFTLAKLLPGCEIF 229
            .|...|:|...||.|.|....|:.||:|:|..||:|.|:|:.|||.|| :.||. |.|.|...:.
Mouse    88 TLEEFGAGLSSTRFICGTQSIHKNLEAKIAHFHQREDAILYPSCFDAN-AGLFE-ALLTPEDAVL 150

  Fly   230 SDAGNHASMIMGIRNSGVPKHIFRHNDVDHLHQLLKQTDKSVPKIVAFETVHSMTGAICPLEELL 294
            ||..||||:|.|||.....|:.:||.|:..|...||:..|...::||.:...||.|.|.||:::.
Mouse   151 SDELNHASIIDGIRLCKAHKYRYRHLDMADLEAKLKEAQKHRLRLVATDGAFSMDGDIAPLQDIC 215

  Fly   295 DVAHEHGAITFIDEVHAVGLYGDHGAGVGERDGVLHKMDIISGTLGKAFGNI-GGYIAGTHNLVD 358
            .:|.::||:.|:||.||.|..|..|.|..|..||:.::.||:.|||||.|.. |||..|...||.
Mouse   216 RLAAQYGALVFVDECHATGFLGPTGRGTDELLGVMDQVTIINSTLGKALGGASGGYTTGPEPLVS 280

  Fly   359 MIRSYAAGFIFTTSLPPTVLCGALEAVNILASEEGRQLRHLHQRNVSYLKSLLKREGFPVEETPS 423
            ::|..:..::|:.||||.|:..|.:|:::|.  |...:...........:|.::..||.|.....
Mouse   281 LLRQRSRPYLFSNSLPPAVVGCASKALDLLM--ESNAIIQSMAAKTRRFRSKMEAAGFTVSGADH 343

  Fly   424 HIIPIKIGDPLKSSQISNVLIEQFGHYLQSINYPTVARGQEKLRLAPTPFHTFEMMNALV 483
            .|.|:.:||...|||:::.:::: |.::...:||.|.:|:.::|:..:..|:.|.::..|
Mouse   344 PICPVMLGDARLSSQMADDMLKK-GIFVIGFSYPVVPKGKARIRVQISAVHSEEDIDRCV 402

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.