DRSC/TRiP Functional Genomics Resources

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Protein Alignment Alas and Sptlc2

DIOPT Version :9

Sequence 1:NP_477281.1 Gene:Alas / 37815 FlyBaseID:FBgn0020764 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_035609.1 Gene:Sptlc2 / 20773 MGIID:108074 Length:560 Species:Mus musculus


Alignment Length:444 Identity:122/444 - (27%)
Similarity:211/444 - (47%) Gaps:51/444 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 YERFFNEQIMKKKRDHSYRVFKKV--------NRLAGDGLFPHALEYSERTEKPITVWCSNDYLG 151
            :|.|:...:..:.||:..|....|        .|.:.|  :..:.:|:....|.:....|.:|||
Mouse   116 FENFYTRNLYMRIRDNWNRPICSVPGAKVDIMERKSHD--YNWSFKYTGNIIKGVINMGSYNYLG 178

  Fly   152 MSAHPG-VKRAVQDALNRHGSGAGGTRNISGNSLHHERLESKLAELHQKEAALLFTSCFVANDST 215
            .:.:.| .:.|..:.|..:|:|...||...||...||.||..:|.....|||:.:...|..|...
Mouse   179 FARNTGSCQEAAAEVLKEYGAGVCSTRQEIGNLDKHEELEKLVARFLGVEAAMTYGMGFATNSMN 243

  Fly   216 LFTLAKLLPGCEIFSDAGNHASMIMGIRNSGVPKHIFRHNDVDHLHQLLK--------QTDKSVP 272
            :..|..  .||.|.||..||||:::|.|.||....||:||::..|.:|||        :|.:...
Mouse   244 IPALVG--KGCLILSDELNHASLVLGARLSGATIRIFKHNNMQSLEKLLKDAIVYGQPRTRRPWK 306

  Fly   273 KI-VAFETVHSMTGAICPLEELLDVAHEHGAITFIDEVHAVGLYGDHGAGVGERDGV-LHKMDII 335
            || :..|.::||.|:|..|.|::.:..::.|..::||.|::|..|..|.||.:..|: ...:|::
Mouse   307 KILILVEGIYSMEGSIVRLPEVIALKKKYKAYLYLDEAHSIGALGPSGRGVVDYFGLDPEDVDVM 371

  Fly   336 SGTLGKAFGNIGGYIAGTHNLVDMIRSYAAGFIFTTSLPPTVLCGALEAVNILASEEGRQL--RH 398
            .||..|:||..||||.|...|:|.:|:::...::.||:.|.|:...:.::..:..::|..|  ..
Mouse   372 MGTFTKSFGASGGYIGGKKELIDYLRTHSHSAVYATSMSPPVMEQIITSMKCIMGQDGTSLGKEC 436

  Fly   399 LHQ--RNVSYLKSLLKREGFPV---EETPSHIIPIKIGDPLKSSQISNVLIEQFGHYLQSINYPT 458
            :.|  .|..|.:..||..||.:   |::|  ::|:.:..|.|        |..||..:...|...
Mouse   437 IQQLAENTRYFRRRLKEMGFIIYGNEDSP--VVPLMLYMPAK--------IGAFGREMLKRNIGV 491

  Fly   459 VARG-------QEKLRLAPTPFHTFEMMNALVTDLKKVWEMVDLSTN----VPL 501
            |..|       :.:.|...:..||.|:::..:.::.:|.:::.|..:    |||
Mouse   492 VVVGFPATPIIESRARFCLSAAHTKEILDTALKEIDEVGDLLQLKYSRHRLVPL 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AlasNP_477281.1 AAT_I 93..495 CDD:302748 118/432 (27%)
BioF 95..490 CDD:223234 117/427 (27%)
Sptlc2NP_035609.1 PLN02483 65..540 CDD:178101 119/437 (27%)
BioF 115..530 CDD:223234 117/427 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0156
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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