DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Alas and Alas1

DIOPT Version :9

Sequence 1:NP_477281.1 Gene:Alas / 37815 FlyBaseID:FBgn0020764 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_001278764.1 Gene:Alas1 / 11655 MGIID:87989 Length:642 Species:Mus musculus


Alignment Length:614 Identity:299/614 - (48%)
Similarity:370/614 - (60%) Gaps:112/614 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 QCPFLNRFTASFIRN-------YAE---------------TLCQSYGSHCPVVGKTLVSGEKKLS 44
            :||||:|...:|::.       ||:               ||..| ..||..|.:|..:.||:.:
Mouse     7 RCPFLSRVPQAFLQKAGKSLLFYAQNCPKMMEVGAKPAPRTLSTS-AVHCQQVKETPPANEKEKT 70

  Fly    45 LVAA-------SVTRSHSTGANAHANAGGPATAN------------------------------- 71
            ..||       |.......|....:....|||:.                               
Mouse    71 AKAAVQQAPDESQMAQTPDGTQLPSGHPSPATSQGSGSKCPFLAAQLSQTGSSVFRKASLELQED 135

  Fly    72 -----------ATAPVSAPAS--------ADPGK-------------------------ASAKET 92
                       |.:||  |.|        .||.:                         ..:..|
Mouse   136 VQEMHAVRKEAAQSPV--PPSLVNVKTDGEDPSRLLKNFQDIMRKQRPERVSHLLQDNLPKSVST 198

  Fly    93 FPYERFFNEQIMKKKRDHSYRVFKKVNRLAGDGLFPHALEYSER--TEKPITVWCSNDYLGMSAH 155
            |.|:.||.::|.:||.||:|||||.|||.|  .:||.|.:|::.  |:|.::|||||||||||.|
Mouse   199 FQYDHFFEKKIDEKKNDHTYRVFKTVNRRA--QIFPMADDYTDSLITKKQVSVWCSNDYLGMSRH 261

  Fly   156 PGVKRAVQDALNRHGSGAGGTRNISGNSLHHERLESKLAELHQKEAALLFTSCFVANDSTLFTLA 220
            |.|..||.:.:.:||:||||||||||.|..|..||..||:||.|:|||||:||||||||||||||
Mouse   262 PRVCGAVMETVKQHGAGAGGTRNISGTSKFHVELEQALADLHGKDAALLFSSCFVANDSTLFTLA 326

  Fly   221 KLLPGCEIFSDAGNHASMIMGIRNSGVPKHIFRHNDVDHLHQLLKQTDKSVPKIVAFETVHSMTG 285
            |::|||||:||:|||||||.|||||.|||:|||||||:||.:||:::|.||||||||||||||.|
Mouse   327 KMMPGCEIYSDSGNHASMIQGIRNSRVPKYIFRHNDVNHLRELLQRSDPSVPKIVAFETVHSMDG 391

  Fly   286 AICPLEELLDVAHEHGAITFIDEVHAVGLYGDHGAGVGERDGVLHKMDIISGTLGKAFGNIGGYI 350
            |:||||||.|||||.|||||:||||||||||..|.|:|:||||:.||||||||||||||.:||||
Mouse   392 AVCPLEELCDVAHEFGAITFVDEVHAVGLYGARGGGIGDRDGVMPKMDIISGTLGKAFGCVGGYI 456

  Fly   351 AGTHNLVDMIRSYAAGFIFTTSLPPTVLCGALEAVNILASEEGRQLRHLHQRNVSYLKSLLKREG 415
            |.|..|:|.:|||||||||||||||.:|.||||:|.||.|.|||.||..|||||..|:.:|...|
Mouse   457 ASTSLLIDTVRSYAAGFIFTTSLPPMLLAGALESVRILKSSEGRALRRQHQRNVKLLRQMLMDAG 521

  Fly   416 FPVEETPSHIIPIKIGDPLKSSQISNVLIEQFGHYLQSINYPTVARGQEKLRLAPTPFHTFEMMN 480
            .||...||||||:::.|..|:::|.:.|:.:...|:|:||||||.||:|.||:||||.||.:|||
Mouse   522 LPVIHCPSHIIPVRVADAAKNTEICDELMTRHNIYVQAINYPTVPRGEELLRIAPTPHHTPQMMN 586

  Fly   481 ALVTDLKKVWEMVDLSTNVPLSPNACMFC 509
            ..|..|...|:.|.|... |.|...|.||
Mouse   587 FFVEKLLVTWKRVGLELK-PHSSAECNFC 614

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AlasNP_477281.1 AAT_I 93..495 CDD:302748 261/403 (65%)
BioF 95..490 CDD:223234 258/396 (65%)
Alas1NP_001278764.1 Preseq_ALAS 2..140 CDD:286162 24/133 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 50..109 14/59 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 144..163 5/20 (25%)
AAT_I 199..604 CDD:302748 262/406 (65%)
BioF 199..600 CDD:223234 260/402 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 489 1.000 Domainoid score I377
eggNOG 1 0.900 - - E1_COG0156
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 543 1.000 Inparanoid score I1151
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG58214
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000902
OrthoInspector 1 1.000 - - otm43285
orthoMCL 1 0.900 - - OOG6_100359
Panther 1 1.100 - - LDO PTHR13693
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R554
SonicParanoid 1 1.000 - - X1924
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.860

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