DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fmo-1 and AT1G63340

DIOPT Version :9

Sequence 1:NP_611859.1 Gene:Fmo-1 / 37814 FlyBaseID:FBgn0034943 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_176523.4 Gene:AT1G63340 / 842640 AraportID:AT1G63340 Length:424 Species:Arabidopsis thaliana


Alignment Length:345 Identity:110/345 - (31%)
Similarity:172/345 - (49%) Gaps:33/345 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VCIIGAGTAGLCCARHSIANGFETTVFELSDRIGGTWVYN----------EATGAVNGIDVHSSM 58
            |.:||||.|||..||.....|....|||..::|||.|.|.          :.|..|    :|||:
plant    14 VAVIGAGAAGLVAARELRREGHSVVVFERGNQIGGVWAYTPNVEPDPLSIDPTRPV----IHSSL 74

  Fly    59 YKNLRTNLPKEVMGFPDFEIGANEASYVRSD-------EICDFLNQYANHFDLKKHIKFDSYVIR 116
            |.:|||.:|:|.|||.||.......:..|..       |:..:|..:|..|.:.:.|:|::.|:|
plant    75 YSSLRTIIPRECMGFTDFPFSTGPENKSRDPRRHPGHIEVLAYLKDFARKFKMDEMIRFETEVVR 139

  Fly   117 ---VLQRKTKWQVLFKDLVTNKIEFQYFDKVLVANGHYHTPNYSQIPNMERFKGQFLHSHDFRSR 178
               ..:...||:|..::  :..|..:.:|.|:|.||||..|.::.||.::...|:.:|||::|..
plant   140 AEPAAENPKKWRVESRN--SGDISDEIYDAVVVCNGHYTEPRHALIPGIDSCPGKQIHSHNYRIP 202

  Fly   179 EVFEGKSVLVIGAGPSGMDLSNIISRTADRVTISHHLTDIGQH---SFFENVQQKPDVRELDEKG 240
            :.|  |..:..|:..||:|:|..|......|.||...|....:   |.::|:....::..:.|.|
plant   203 DQF--KDQVNSGSSVSGVDISRDIVNVTKEVHISSRSTKPETYEKLSGYDNLWLHSNIETVREDG 265

  Fly   241 A-FFVDGSYQEFDTVFFCTGYKYAFPFLTVDSGIYVEDNYVQELYKQCI-NIRNPSMALIGLPFY 303
            : .|.:|.....||:..||||||.||||.....:.||||.|..|||... ...:|.::.||||:.
plant   266 SVVFKNGKTVYADTIMHCTGYKYYFPFLDTKGEVTVEDNRVGPLYKHVFPPALSPGLSFIGLPWQ 330

  Fly   304 VCAAQMMDIQARFIMSYYNG 323
            |....|.::|::::.:...|
plant   331 VILFPMFELQSKWVAAVLAG 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fmo-1NP_611859.1 NADB_Rossmann 5..197 CDD:304358 67/211 (32%)
NADB_Rossmann 185..>211 CDD:304358 7/25 (28%)
AT1G63340NP_176523.4 PLN02172 1..419 CDD:215116 110/345 (32%)
TIGR04141 172..>259 CDD:275009 26/88 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 150 1.000 Domainoid score I1415
eggNOG 1 0.900 - - E1_COG2072
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H101446
Inparanoid 1 1.050 225 1.000 Inparanoid score I1172
OMA 1 1.010 - - QHG55225
OrthoDB 1 1.010 - - D405736at2759
OrthoFinder 1 1.000 - - FOG0000093
OrthoInspector 1 1.000 - - mtm1034
orthoMCL 1 0.900 - - OOG6_100150
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X69
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.740

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