DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fmo-1 and AT1G62600

DIOPT Version :9

Sequence 1:NP_611859.1 Gene:Fmo-1 / 37814 FlyBaseID:FBgn0034943 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_176448.1 Gene:AT1G62600 / 842557 AraportID:AT1G62600 Length:452 Species:Arabidopsis thaliana


Alignment Length:414 Identity:129/414 - (31%)
Similarity:207/414 - (50%) Gaps:65/414 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VCIIGAGTAGLCCARHSIANGFETTVFELSDRIGGTWVYN----------EATGAVNGIDVHSSM 58
            |.:||||.|||..||.....|....|||...::||||:|.          :.|.:|    ||||:
plant    13 VAVIGAGAAGLVAARELRREGHSVVVFERQKQVGGTWIYTDHIEPDPLSVDPTRSV----VHSSV 73

  Fly    59 YKNLRTNLPKEVMGFPDFEIGANEASYVRSD--------------EICDFLNQYANHFDLKKHIK 109
            |.:||||||:|.||:.||..      .:|||              |:..:|..:|..|.:::.|:
plant    74 YGSLRTNLPRECMGYRDFPF------VIRSDVSESRDPRRFPSHGEVLAYLQDFAKEFAIEEMIR 132

  Fly   110 FDSYVIRVL----QRKTKWQVLFKDLVTNKIEFQYFDKVLVANGHYHTPNYSQIPNMERFKGQFL 170
            ||:.|::|.    :...||::...:.....:..:.:|.|:|.||||..|.:::||.:..:.|:.:
plant   133 FDTAVVKVAPAAEEGSGKWRIESTEKEKKVLRDEIYDAVVVCNGHYIEPRHAEIPGISSWPGKEM 197

  Fly   171 HSHDFRSREVFEGKSVLVIGAGPSGMDLSNIISRTADRVTISHH------------LTDIGQHSF 223
            |||::|..|.|..:.|::||...|..|:|..|:|.|..|.::..            .:::..||.
plant   198 HSHNYRIPEPFRDQVVVLIGNSASADDISRDIARVAKEVHVACRSNAADTYIERPGYSNLWMHSM 262

  Fly   224 FENVQQKPDVRELDEKGAFFVDGSYQEFDTVFFCTGYKYAFPFLTVDSGIYVEDNYVQELYKQCI 288
            .|:|.:...|        .|.:|.....|.:..||||||.||||..:..:.|:||.|..|||   
plant   263 IESVHEDGSV--------VFQNGKTISVDVIMHCTGYKYHFPFLETNGNVTVDDNRVGPLYK--- 316

  Fly   289 NIRNPSMA----LIGLPFYVCAAQMMDIQARFIMSYYNGSNELPSTEDMLKDTRDRMGKLWAEGL 349
            ::.:|:.|    .:|:|:.|....|.::|:::|....:|...|||.|||:.:.:.....|.|:|:
plant   317 DVFSPAFAPWLSFVGIPWKVVPFPMFELQSKWIAGVLSGRIPLPSKEDMMMEIKTLYSTLDAQGI 381

  Fly   350 RKRHAHMLGPKQIDYFTDLSQTAG 373
            .||:.|.:|..|.:|.:.|:...|
plant   382 AKRYTHQMGISQFEYNSWLASQCG 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fmo-1NP_611859.1 NADB_Rossmann 5..197 CDD:304358 71/219 (32%)
NADB_Rossmann 185..>211 CDD:304358 10/25 (40%)
AT1G62600NP_176448.1 PLN02172 1..449 CDD:215116 129/414 (31%)
NADB_Rossmann 35..242 CDD:304358 67/216 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 150 1.000 Domainoid score I1415
eggNOG 1 0.900 - - E1_COG2072
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H101446
Inparanoid 1 1.050 225 1.000 Inparanoid score I1172
OMA 1 1.010 - - QHG55225
OrthoDB 1 1.010 - - D405736at2759
OrthoFinder 1 1.000 - - FOG0000093
OrthoInspector 1 1.000 - - mtm1034
orthoMCL 1 0.900 - - OOG6_100150
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X69
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.740

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