DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fmo-1 and FMO GS-OX4

DIOPT Version :9

Sequence 1:NP_611859.1 Gene:Fmo-1 / 37814 FlyBaseID:FBgn0034943 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_564797.1 Gene:FMO GS-OX4 / 842554 AraportID:AT1G62570 Length:461 Species:Arabidopsis thaliana


Alignment Length:404 Identity:130/404 - (32%)
Similarity:205/404 - (50%) Gaps:40/404 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VCIIGAGTAGLCCARHSIANGFETTVFELSDRIGGTWVYNEATGAVN-GID-----VHSSMYKNL 62
            |.:||||.|||..||.....|....|.:...::||.|||...|.:.. |:|     ||||:||:|
plant    13 VAVIGAGAAGLVAARELRREGHTVVVLDREKQVGGLWVYTPETESDELGLDPTRPIVHSSVYKSL 77

  Fly    63 RTNLPKEVMGFPDF-------EIGANEASYVRSDEICDFLNQYANHFDLKKHIKFDSYVIRVLQR 120
            |||||:|.||:.||       :...:...|....|:..:|..:|..|::::.|:|::.|:||...
plant    78 RTNLPRECMGYKDFPFVPRGDDPSRDSRRYPSHREVLAYLQDFATEFNIEEMIRFETEVLRVEPV 142

  Fly   121 KTKWQVLFK-------DLVTNKIEFQYFDKVLVANGHYHTPNYSQIPNMERFKGQFLHSHDFRSR 178
            ..||:|..|       |        :.:|.|::..||:..||.:|||.:|.:.|:..|||.:|..
plant   143 NGKWRVQSKTGGGFSND--------EIYDAVVMCCGHFAEPNIAQIPGIESWPGRQTHSHSYRVP 199

  Fly   179 EVFEGKSVLVIGAGPSGMDLSNIISRTADRVTISHHLTDIGQHSFFE-------NVQQKPDVREL 236
            :.|:.:.|:|||...||.|:|..||:.|..|   |..:...:.:.||       |:....::...
plant   200 DPFKDEVVVVIGNFASGADISRDISKVAKEV---HIASRASKSNTFEKRPVPNNNLWMHSEIDTA 261

  Fly   237 DEKGAF-FVDGSYQEFDTVFFCTGYKYAFPFLTVDSGIYVEDNYVQELYKQCI-NIRNPSMALIG 299
            .|.|.. |.:|.....||:..||||||.||||..::.:.|:||.|:.|||... ....|.::.||
plant   262 HEDGTIVFKNGKVVHADTIVHCTGYKYYFPFLETNNYMRVDDNRVEPLYKHIFPPALAPGLSFIG 326

  Fly   300 LPFYVCAAQMMDIQARFIMSYYNGSNELPSTEDMLKDTRDRMGKLWAEGLRKRHAHMLGPKQIDY 364
            ||.......|.::|::::.:..:|...|||.::|:.|.:.......|.|:.||:.|.||..|.:|
plant   327 LPAMGLQFYMFEVQSKWVAAVLSGRVTLPSVDEMMDDLKLSYETQEALGIPKRYTHKLGKSQCEY 391

  Fly   365 FTDLSQTAGVKNIK 378
            ...::...|..:::
plant   392 LDWIADLCGFPHVE 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fmo-1NP_611859.1 NADB_Rossmann 5..197 CDD:304358 73/211 (35%)
NADB_Rossmann 185..>211 CDD:304358 12/25 (48%)
FMO GS-OX4NP_564797.1 PLN02172 1..461 CDD:215116 130/404 (32%)
NADB_Rossmann 35..235 CDD:304358 70/210 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 150 1.000 Domainoid score I1415
eggNOG 1 0.900 - - E1_COG2072
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H101446
Inparanoid 1 1.050 225 1.000 Inparanoid score I1172
OMA 1 1.010 - - QHG55225
OrthoDB 1 1.010 - - D405736at2759
OrthoFinder 1 1.000 - - FOG0000093
OrthoInspector 1 1.000 - - mtm1034
orthoMCL 1 0.900 - - OOG6_100150
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X69
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.740

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