DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fmo-1 and FMO GS-OX3

DIOPT Version :9

Sequence 1:NP_611859.1 Gene:Fmo-1 / 37814 FlyBaseID:FBgn0034943 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_176444.1 Gene:FMO GS-OX3 / 842553 AraportID:AT1G62560 Length:462 Species:Arabidopsis thaliana


Alignment Length:397 Identity:124/397 - (31%)
Similarity:210/397 - (52%) Gaps:25/397 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VCIIGAGTAGLCCARHSIANGFETTVFELSDRIGGTWVYN-EATGAVNGID-----VHSSMYKNL 62
            |.:||||.|||..:|.....|....|||...::||.|||. ::......:|     ||||:|::|
plant    13 VAVIGAGPAGLITSRELRREGHSVVVFEREKQVGGLWVYTPKSDSDPLSLDPTRSKVHSSIYESL 77

  Fly    63 RTNLPKEVMGFPDF-------EIGANEASYVRSDEICDFLNQYANHFDLKKHIKFDSYVIRVLQ- 119
            |||:|:|.||..||       :...:...|....|:..::..:|..|.:::.|:|::.|:||.. 
plant    78 RTNVPRESMGVRDFPFLPRFDDESRDARRYPNHREVLAYIQDFAREFKIEEMIRFETEVVRVEPV 142

  Fly   120 RKTKWQVLFKDLVTNKIEFQYFDKVLVANGHYHTPNYSQIPNMERFKGQFLHSHDFRSREVFEGK 184
            ....|:|..|: ....:|.:.:|.|:|.||||..||.:.||.::.:.|:.:|||::|..:.||.:
plant   143 DNGNWRVQSKN-SGGFLEDEIYDAVVVCNGHYTEPNIAHIPGIKSWPGKQIHSHNYRVPDPFENE 206

  Fly   185 SVLVIGAGPSGMDLSNIISRTADRVTISHHLTDIGQHSFFE------NVQQKPDVRELDEKGAF- 242
            .|:|||...||.|:|..|::.|..|.|:....:  .|::.:      |:....::....|.|:. 
plant   207 VVVVIGNFASGADISRDIAKVAKEVHIASRARE--PHTYEKISVPQNNLWMHSEIDTTHEDGSIV 269

  Fly   243 FVDGSYQEFDTVFFCTGYKYAFPFLTVDSGIYVEDNYVQELYKQCI-NIRNPSMALIGLPFYVCA 306
            |.:|.....|::.:||||||.||||..:..:.:::..|:.|||... ....|.:|.:|||.....
plant   270 FKNGKVIFADSIVYCTGYKYNFPFLETNGYLRIDEKRVEPLYKHVFPPALAPGLAFVGLPAMGIV 334

  Fly   307 AQMMDIQARFIMSYYNGSNELPSTEDMLKDTRDRMGKLWAEGLRKRHAHMLGPKQIDYFTDLSQT 371
            ..|.:||::::.:..:|...||||:.|::|.......|.|.|:.|||.|.:|..|.:|...:::.
plant   335 FVMFEIQSKWVAAVLSGRVTLPSTDKMMEDINAWYASLDALGIPKRHTHTIGRIQSEYLNWVAKE 399

  Fly   372 AGVKNIK 378
            :|.:.::
plant   400 SGCELVE 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fmo-1NP_611859.1 NADB_Rossmann 5..197 CDD:304358 70/205 (34%)
NADB_Rossmann 185..>211 CDD:304358 11/25 (44%)
FMO GS-OX3NP_176444.1 PLN02172 1..462 CDD:215116 124/397 (31%)
NADB_Rossmann 14..238 CDD:304358 76/224 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 150 1.000 Domainoid score I1415
eggNOG 1 0.900 - - E1_COG2072
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H101446
Inparanoid 1 1.050 225 1.000 Inparanoid score I1172
OMA 1 1.010 - - QHG55225
OrthoDB 1 1.010 - - D405736at2759
OrthoFinder 1 1.000 - - FOG0000093
OrthoInspector 1 1.000 - - mtm1034
orthoMCL 1 0.900 - - OOG6_100150
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X69
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.740

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