DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fmo-1 and YUC10

DIOPT Version :9

Sequence 1:NP_611859.1 Gene:Fmo-1 / 37814 FlyBaseID:FBgn0034943 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_175321.1 Gene:YUC10 / 841313 AraportID:AT1G48910 Length:383 Species:Arabidopsis thaliana


Alignment Length:336 Identity:77/336 - (22%)
Similarity:125/336 - (37%) Gaps:103/336 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VCIIGAGTAGL----CCARHSIANGFETTVFELSDRIGGTWVYNEATGAVNGIDVHSSMYKNLRT 64
            |.|:|||.|||    |..:|||.|    .:.|..|.....|              ....|..|:.
plant     5 VVIVGAGPAGLATSVCLNQHSIPN----VILEKEDIYASLW--------------KKRAYDRLKL 51

  Fly    65 NLPKEVMGFPDFEIGANEASYVRSDEICDFLNQYANHFDLK-------KHIKFDSYVIRVLQRKT 122
            :|.||....|....|....:::..:...::|:.|...||:.       |...||       :...
plant    52 HLAKEFCQLPFMPHGREVPTFMSKELFVNYLDAYVARFDINPRYNRTVKSSTFD-------ESNN 109

  Fly   123 KWQVLFKDLVTNKIEFQYFDKVLVANGHYHTPNYSQIPNMERFKGQFLHSHDFRSREVFEGKSVL 187
            ||:|:.::.||.:.|..:.:.::||.|.....|...:..::.|.|:.:||.:::|...|:.|:||
plant   110 KWRVVAENTVTGETEVYWSEFLVVATGENGDGNIPMVEGIDTFGGEIMHSSEYKSGRDFKDKNVL 174

  Fly   188 VIGAGPSGMDLS----------NIISRTADRVTISH--HL------------------------- 215
            |:|.|.|||::|          .|:.||...|....  ||                         
plant   175 VVGGGNSGMEISFDLCNFGANTTILIRTPRHVVTKEVIHLGMTLLKYAPVAMVDTLVTTMAKILY 239

  Fly   216 TDIGQHSFFE---------------------NVQQKPD---------VRELDEKGAFFVDGSYQE 250
            .|:.::..|.                     .|::..|         :..::.|...|.:|..|:
plant   240 GDLSKYGLFRPKQGPFATKLFTGKAPVIDVGTVEKIRDGEIQVINGGIGSINGKTLTFENGHKQD 304

  Fly   251 FDTVFFCTGYK 261
            ||.:.|.||||
plant   305 FDAIVFATGYK 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fmo-1NP_611859.1 NADB_Rossmann 5..197 CDD:304358 53/202 (26%)
NADB_Rossmann 185..>211 CDD:304358 13/35 (37%)
YUC10NP_175321.1 CzcO 5..350 CDD:224983 77/336 (23%)
NADB_Rossmann 6..184 CDD:304358 53/202 (26%)
NADB_Rossmann 172..>204 CDD:304358 12/31 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2072
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D405736at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR43539
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X69
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

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