DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fmo-1 and FMO1

DIOPT Version :9

Sequence 1:NP_611859.1 Gene:Fmo-1 / 37814 FlyBaseID:FBgn0034943 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_173359.3 Gene:FMO1 / 838508 AraportID:AT1G19250 Length:530 Species:Arabidopsis thaliana


Alignment Length:519 Identity:120/519 - (23%)
Similarity:173/519 - (33%) Gaps:182/519 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VCIIGAGTAGLCCARHSIANGFETTVFELSDRIGGTWVYNEATGAVNGIDVHSSMYKNLRTNLPK 68
            |.|||||.:||..|::.:.:  ..||||.||.:||.|              .|..|:..:....:
plant    13 VAIIGAGVSGLAAAKNLVHH--NPTVFEASDSVGGVW--------------RSCTYETTKLQSAR 61

  Fly    69 EVMGFPDFEIGANEASYVRSD-------EICDFLNQYANHFDLKKHIKFDSYVIRV--------- 117
            ....|.||....|     |.|       ||.|:|..||.||||.|.:||.|.||.|         
plant    62 VDYEFSDFPWPNN-----RDDTTFPPYLEILDYLESYAKHFDLLKFMKFGSKVIEVRFIGDGETP 121

  Fly   118 -----------LQRKTKWQVLFKDLVTNKIEFQYFDKVLVANGHY----HTPNYSQIPNMERFKG 167
                       |..|..|:|..:...:..|::..|:.|:|..|.|    ..|.:......|.|:|
plant   122 QMVDLGAYGNLLPGKPVWEVAVQIGDSGDIQWHAFEFVVVCTGKYGDVPRIPAFPAKKGPEMFQG 186

  Fly   168 QFLHSHDFRSRE------VFEGKSVLVIGAGPSGMDLS---------------NIISRT------ 205
            :.:||.|:...|      :..||.|.|||...|.:||:               .::.||      
plant   187 KVMHSMDYCKLEKEEASTLLSGKKVAVIGFKKSAIDLALESALANQGEGGKACTMVVRTTHWGIP 251

  Fly   206 -------------ADRVTISHHLTDIGQHSF-----------------------------FENVQ 228
                         :.|.  |..|.|....||                             .|...
plant   252 HYWVWGLPFFLFYSSRA--SQFLHDRPNQSFLRTLFCLLFSLLRAVVSKFIESYVLWKLPLEKYG 314

  Fly   229 QKPD-------------------VRELD---------------EKGAFFVDGSYQEFDTVFFCTG 259
            .||:                   ..|.|               |:|..|.||:..|.|.|...||
plant   315 LKPNHSFEEDYASCQMAIIPENFFEEADKGMIRFKKSSKWWFYEEGIVFEDGTTLEADVVILATG 379

  Fly   260 Y------KYAFP-----FLTVDSGIYVEDNYVQELYKQCINIRNPSMALIGLPFYVCAAQMM--- 310
            |      |...|     :|...||       |..||:..|:...|:|..:|   ||.::..:   
plant   380 YDGKKKLKAIVPEPFRTWLEFPSG-------VMPLYRGTIHPLIPNMGFVG---YVQSSSNLHTS 434

  Fly   311 DIQARFIMSYYNGSNELPSTEDMLKDTRDRMGKLWAEGLRKRHAHMLGPKQIDYFTDLSQTAGV 374
            ::::.::....:....|||.|.||......| ::.....|....|.:....|.:..|:....|:
plant   435 ELRSMWLSRLVDEKFRLPSKEKMLDQFLKEM-EVTRNSSRFYKRHCISTFSIQHADDMCNDMGL 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fmo-1NP_611859.1 NADB_Rossmann 5..197 CDD:304358 67/228 (29%)
NADB_Rossmann 185..>211 CDD:304358 10/59 (17%)
FMO1NP_173359.3 FMO-like 12..520 CDD:109787 120/519 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2072
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D405736at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100150
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X69
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.720

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