DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fmo-1 and FMO

DIOPT Version :9

Sequence 1:NP_611859.1 Gene:Fmo-1 / 37814 FlyBaseID:FBgn0034943 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_172684.1 Gene:FMO / 837773 AraportID:AT1G12200 Length:465 Species:Arabidopsis thaliana


Alignment Length:449 Identity:136/449 - (30%)
Similarity:231/449 - (51%) Gaps:49/449 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VCIIGAGTAGLCCARHSIANGFETTVFELSDRIGGTWVYNEATGAVN----GID-----VHSSMY 59
            |.:||||.|||..||.....|....|.|...:|||.|.|   |..|.    .:|     ||||:|
plant    14 VAVIGAGAAGLVAARELRREGHSVVVLERGSQIGGVWAY---TSQVEPDPLSLDPTRPVVHSSLY 75

  Fly    60 KNLRTNLPKEVMGFPDFEIGANEASYVRS-------DEICDFLNQYANHFDLKKHIKFDSYVIRV 117
            ::||||:|:|.|||.||..........|.       .|:..:|..:|..||:::.::|::.|::.
plant    76 RSLRTNIPRECMGFTDFPFATRPHDGSRDPRRHPAHTEVLAYLRDFAKEFDIEEMVRFETEVVKA 140

  Fly   118 LQ------RKTKWQVLFK--DLVTNKIEFQYFDKVLVANGHYHTPNYSQIPNMERFKGQFLHSHD 174
            .|      .:.||:|..:  |.|.::|    :|.|:|.||||..|.::.|..::.:.|:.:|||:
plant   141 EQVAAEGEERGKWRVESRSSDGVVDEI----YDAVVVCNGHYTEPRHALITGIDSWPGKQIHSHN 201

  Fly   175 FRSREVFEGKSVLVIGAGPSGMDLSNIISRTADRVTISHHLTDIGQH---SFFENVQQKPDVREL 236
            :|..:.|:.:.|:|||:..||:|:...|::.|..|.:|...|....:   :.:||:.....::..
plant   202 YRVPDQFKDQVVIVIGSSASGVDICRDIAQVAKEVHVSSRSTSPDTYEKLTGYENLWLHSTIQIA 266

  Fly   237 DEKGA-FFVDGSYQEFDTVFFCTGYKYAFPFLTVDSGIYVEDNYVQELYKQCI-NIRNPSMALIG 299
            .|.|: .|.:|.....||:..||||||.||||.....:.|:||.|..|||... ....||::.||
plant   267 REDGSVVFENGKTIYADTIMHCTGYKYYFPFLDTKGEVTVDDNRVGPLYKHVFPPALAPSLSFIG 331

  Fly   300 LPFYVCAAQMMDIQARFIMSYYNGSNELPSTEDMLKDTRDRMGKLWAEGLRKRHAHML-GPKQID 363
            ||:.:....|.::|::::.:..:|...|||.::|::||:....||.|.|:.||:.|:: ...|.:
plant   332 LPWQITPFPMFELQSKWVAAVLSGRVSLPSQDEMMEDTKAFYDKLEASGIPKRYTHLMPDDSQFE 396

  Fly   364 Y---FTDLSQTAGVKNIKPVM-----TKLHNESSKCFNENLLHFREDNFAILDDETFIK 414
            |   ..|..:...::..:..|     .:::.:|| .:.:|   :.:|:..:...:.|:|
plant   397 YDNWLADQCEYPRIEKWREQMFYIGFKRIYAQSS-TYRDN---WDDDHLIVEAYDDFVK 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fmo-1NP_611859.1 NADB_Rossmann 5..197 CDD:304358 72/215 (33%)
NADB_Rossmann 185..>211 CDD:304358 10/25 (40%)
FMONP_172684.1 PLN02172 6..451 CDD:215116 135/447 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 150 1.000 Domainoid score I1415
eggNOG 1 0.900 - - E1_COG2072
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H101446
Inparanoid 1 1.050 225 1.000 Inparanoid score I1172
OMA 1 1.010 - - QHG55225
OrthoDB 1 1.010 - - D405736at2759
OrthoFinder 1 1.000 - - FOG0000093
OrthoInspector 1 1.000 - - mtm1034
orthoMCL 1 0.900 - - OOG6_100150
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X69
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.740

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