DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fmo-1 and AT1G12160

DIOPT Version :9

Sequence 1:NP_611859.1 Gene:Fmo-1 / 37814 FlyBaseID:FBgn0034943 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_172680.1 Gene:AT1G12160 / 837768 AraportID:AT1G12160 Length:468 Species:Arabidopsis thaliana


Alignment Length:451 Identity:141/451 - (31%)
Similarity:224/451 - (49%) Gaps:41/451 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VCIIGAGTAGLCCARHSIANGFETTVFELSDRIGGTWVYNEATGAVN-GID-----VHSSMYKNL 62
            |.:||.|.|||...|.....|.....||....:||.|||.:...:.: .:|     ||||:|::|
plant    12 VAVIGLGAAGLVAVRELRREGHTVIGFEREKHVGGLWVYTDRVDSDSVSVDPDRTIVHSSIYQSL 76

  Fly    63 RTNLPKEVMGFPDFEIGANEAS-----YVRSDEICDFLNQYANHFDLKKHIKFDSYVIRV---LQ 119
            |||||:|.||:.||......:.     |....|:..:|..:|..|.::..|:|::.|:.|   .:
plant    77 RTNLPRECMGYSDFPFVTRSSDGDPRRYPDHREVLMYLQDFAKEFKIEDMIRFETEVLCVEPSPE 141

  Fly   120 RKTKWQVLFKDLVTNKIE-FQYFDKVLVANGHYHTPNYSQIPNMERFKGQFLHSHDFRSREVFEG 183
            ...||:|.||.  :|.:. .:.||.|:|.|||:..|..:.||.:|.:.|:.:|||::|..:.|:.
plant   142 NNRKWRVQFKS--SNGVSGEEIFDAVVVCNGHFTEPRLAHIPGIESWPGKQIHSHNYRIPDPFKD 204

  Fly   184 KSVLVIGAGPSGMDLSNIISRTADRVTISHHLTDIGQHSFFENVQQKPDVRELDEKGA-FFVDGS 247
            :.|:|||:..||.|:|..|:..|..|.||..:.....:..::|::..|.:....|.|: .|.:|.
plant   205 EVVIVIGSQASGNDISTDIATIAKEVHISSKMVASDSYGCYDNLRIHPTIYRAREDGSVVFRNGK 269

  Fly   248 YQEFDTVFFCTGYKYAFPFLTVDSGIYVEDNYVQELYKQCI-NIRNPSMALIGLPFYVCAAQMMD 311
            ....|.:..||||||.||||.....:.||||.|..|||... ....|.::.|||||......|.:
plant   270 VVFADAIVHCTGYKYHFPFLKTSGYVTVEDNRVGPLYKHVFPPALAPGISFIGLPFMGLQFFMFE 334

  Fly   312 IQARFIMSYYNGSNELPSTEDMLKDTRDRMGKLWAEGLRKRHAH---------MLGP-------- 359
            ||::::.|..:|..:||:.:.|:::......||...|:.||:.|         |||.        
plant   335 IQSKWVASVLSGRVKLPAEDKMMEEAVAFYSKLEDLGIPKRYTHFLTDPRGNPMLGTFKPEDAVV 399

  Fly   360 -KQIDYFTDLSQTAGVKNIKPVMTKLHNESSK--CFNENLLHFREDNFAILDD--ETFIKL 415
             .|.|||..:::..|..:|:....:|:|.:.|  .|..:....|.|:..::::  ..|.||
plant   400 ISQSDYFNWIAKQCGCTSIERWRERLYNVAIKKVFFGGDSYRDRWDDDQLIEEVYREFAKL 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fmo-1NP_611859.1 NADB_Rossmann 5..197 CDD:304358 70/206 (34%)
NADB_Rossmann 185..>211 CDD:304358 11/25 (44%)
AT1G12160NP_172680.1 PLN02172 9..461 CDD:215116 141/451 (31%)
NAD_binding_8 14..>55 CDD:290186 15/40 (38%)
P-loop_NTPase 171..>250 CDD:304359 25/78 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 150 1.000 Domainoid score I1415
eggNOG 1 0.900 - - E1_COG2072
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H101446
Inparanoid 1 1.050 225 1.000 Inparanoid score I1172
OMA 1 1.010 - - QHG55225
OrthoDB 1 1.010 - - D405736at2759
OrthoFinder 1 1.000 - - FOG0000093
OrthoInspector 1 1.000 - - mtm1034
orthoMCL 1 0.900 - - OOG6_100150
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X69
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.740

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