DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fmo-1 and AT1G12130

DIOPT Version :9

Sequence 1:NP_611859.1 Gene:Fmo-1 / 37814 FlyBaseID:FBgn0034943 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_172677.1 Gene:AT1G12130 / 837765 AraportID:AT1G12130 Length:470 Species:Arabidopsis thaliana


Alignment Length:444 Identity:147/444 - (33%)
Similarity:221/444 - (49%) Gaps:48/444 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SVCIIGAGTAGLCCARHSIANGFETTVFELSDRIGGTWVYNEATGAVN----GID-----VHSSM 58
            :|.:||||.|||..||.....|...|:||...::||.||   .|..|.    .||     ||||:
plant    12 NVAVIGAGAAGLVAARELRREGHTVTIFERQKQVGGLWV---CTPNVEPDLLSIDPDRTVVHSSV 73

  Fly    59 YKNLRTNLPKEVMGFPDF-------EIGANEASYVRSDEICDFLNQYANHFDLKKHIKFDSYVIR 116
            |::||||||:|.||:.||       :...:...|....|:..:|..:|..|.:::.|:|::.|.|
plant    74 YQSLRTNLPRECMGYSDFPFVTRPDDESRDPRRYPDHREVMRYLQDFAKEFKIEEMIRFETEVFR 138

  Fly   117 V---LQRKTKWQVLFKDL--VTNKIEFQYFDKVLVANGHYHTPNYSQIPNMERFKGQFLHSHDFR 176
            |   .:...||:|.|:..  |:.:   ..||.|::.|||:..|..:.||.:|.:.|:.:|||::|
plant   139 VEPTAENSCKWRVQFRSSSGVSGE---DIFDAVVICNGHFTEPRLAHIPGIESWPGKQIHSHNYR 200

  Fly   177 SREVFEGKSVLVIGAGPSGMDLSNIISRTADRVTISHHLTDIG-QHSFFENVQQKPDVRELDEKG 240
            ..:.|:|:.|:|||...||.|:|..|:..|..|.|:....... :.|.:.|:...|.:..:.|.|
plant   201 VSDPFKGQVVIVIGYQSSGSDISRDIAILAKEVHIAAKSDAYAKESSIYSNLHFHPTIDRVYEDG 265

  Fly   241 A-FFVDGSYQEFDTVFFCTGYKYAFPFLTVDSGIYVEDNYVQELYKQCI-NIRNPSMALIGLPFY 303
            : .|.||.....|.:..||||||.||||.....:.||||.|..|||... ....|.::.||||..
plant   266 SVVFQDGKLIFADAIVHCTGYKYCFPFLETKGYVNVEDNRVGPLYKHVFPPALAPGLSFIGLPSM 330

  Fly   304 VCAAQMMDIQARFIMSYYNGSNELPSTEDMLKDTRDRMGKLWAEGLRKRHAHMLGPKQIDYFTDL 368
            .....|.:||:|::.|..:|..:|||.|.|::|......||.:.|:.||..|.|        ||.
plant   331 ALQFFMFEIQSRWVASVLSGRVKLPSEEQMMEDVIAFYAKLKSLGIPKRFTHFL--------TDP 387

  Fly   369 SQTAGVKNIKPVMTKLHNES-------SKCFNENLLHFREDNFAIL---DDETF 412
            ..|...:.:||....|.::|       .:|...::..:||:.:.|.   ||:.|
plant   388 QWTPMFEKLKPHEAVLISQSEYFNWIAEQCGCSSIERWREEQYNIAIKKDDDNF 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fmo-1NP_611859.1 NADB_Rossmann 5..197 CDD:304358 75/212 (35%)
NADB_Rossmann 185..>211 CDD:304358 11/25 (44%)
AT1G12130NP_172677.1 PLN02172 1..463 CDD:215116 147/444 (33%)
NADB_Rossmann 21..242 CDD:304358 77/226 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 150 1.000 Domainoid score I1415
eggNOG 1 0.900 - - E1_COG2072
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H101446
Inparanoid 1 1.050 225 1.000 Inparanoid score I1172
OMA 1 1.010 - - QHG55225
OrthoDB 1 1.010 - - D405736at2759
OrthoFinder 1 1.000 - - FOG0000093
OrthoInspector 1 1.000 - - mtm1034
orthoMCL 1 0.900 - - OOG6_100150
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X69
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.740

Return to query results.
Submit another query.