DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fmo-1 and YUC6

DIOPT Version :9

Sequence 1:NP_611859.1 Gene:Fmo-1 / 37814 FlyBaseID:FBgn0034943 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_001190399.2 Gene:YUC6 / 832638 AraportID:AT5G25620 Length:434 Species:Arabidopsis thaliana


Alignment Length:341 Identity:72/341 - (21%)
Similarity:110/341 - (32%) Gaps:105/341 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 IIGAGTAGLCCARHSIANGFETTVFELSDRIGGTWVYNEATGAVNGIDVHSSMYKNLRTNLPKEV 70
            |:|||.:||..|......|..:.:.|.|:.|...|              ....|..|..:|||:.
plant    34 IVGAGPSGLATAACLKERGITSVLLERSNCIASLW--------------QLKTYDRLHLHLPKQF 84

  Fly    71 MGFPDFEIGANEASYVRSDEICDFLNQYANHFDLKKHIK-------FDSYVIRVLQRKTKWQVLF 128
            ...|......:..:|....:..::|..||..||:|....       ||       :....|:|  
plant    85 CELPIIPFPGDFPTYPTKQQFIEYLEDYARRFDIKPEFNQTVESAAFD-------ENLGMWRV-- 140

  Fly   129 KDLVTNKIEFQYFDKVLV-ANGHYHTPNYSQIPNMERF--KGQFLHSHDFRSREVFEGKSVLVIG 190
             ..|..:...:|..:.|| |.|....|...:...|::|  .|...|:..:::...|.||.|||:|
plant   141 -TSVGEEGTTEYVCRWLVAATGENAEPVVPRFEGMDKFAAAGVVKHTCHYKTGGDFAGKRVLVVG 204

  Fly   191 AGPSGM----DLSNIISRTADRVTISHHLTD---IGQHSF------------------------- 223
            .|.|||    ||.|..::.:..|..:.|:..   :|..:|                         
plant   205 CGNSGMEVCLDLCNFGAQPSLVVRDAVHVLPREMLGTSTFGLSMFLLKWLPIRLVDRFLLVVSRF 269

  Fly   224 -------------------FENVQQKPDV--------------------RELDEKGAFFVDGSYQ 249
                               .:|:..|..|                    |.|......|.:|..:
plant   270 ILGDTTLLGLNRPRLGPLELKNISGKTPVLDVGTLAKIKTGDIKVCSGIRRLKRHEVEFDNGKTE 334

  Fly   250 EFDTVFFCTGYKYAFP 265
            .||.:...||||...|
plant   335 RFDAIILATGYKSNVP 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fmo-1NP_611859.1 NADB_Rossmann 5..197 CDD:304358 51/204 (25%)
NADB_Rossmann 185..>211 CDD:304358 12/29 (41%)
YUC6NP_001190399.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2072
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR43539
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X69
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.910

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