DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fmo-1 and LOC685351

DIOPT Version :9

Sequence 1:NP_611859.1 Gene:Fmo-1 / 37814 FlyBaseID:FBgn0034943 Length:416 Species:Drosophila melanogaster
Sequence 2:XP_008767943.1 Gene:LOC685351 / 685351 RGDID:1595097 Length:538 Species:Rattus norvegicus


Alignment Length:484 Identity:137/484 - (28%)
Similarity:204/484 - (42%) Gaps:128/484 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VCIIGAGTAGL----CCARHSIANGFETTVFELSDRIGGTWVYNEATGAVN-GIDVHSSMYKNLR 63
            |.:||||.:||    ||    :..|.|.|.||....|||.|.|.|.:.:.| ||      ||:|.
  Rat     6 VAVIGAGVSGLGAIKCC----LDEGLEPTCFEKRSDIGGLWKYEEISKSGNLGI------YKSLT 60

  Fly    64 TNLPKEVMGFPDFEIGANEASYVRSDEICDFLNQYANHFDLKKHIKFDSYVIRVLQR-----KTK 123
            .|..||:..|.|:.|..:..:|:.:.::.::|..||.||.|.|||:|.:.|..:.:|     ..:
  Rat    61 CNTSKEMTAFSDYPIPDHYPNYMHNSKMMEYLRMYARHFGLLKHIQFQTKVCSIKKRPDFSSSGQ 125

  Fly   124 WQVLFKDLVTNKIEFQYFDKVLVANGHY---HTPNYSQIPNMERFKGQFLHSHDFRSREVFEGKS 185
            |.|:.:...|.|.  ..||.::|.:|||   |.| ......:.:|:|..|||.:::....|.||.
  Rat   126 WDVVVETGETQKT--YIFDGIMVCSGHYTEKHFP-LQDFEGISKFQGSCLHSWEYKHPNSFSGKR 187

  Fly   186 VLVIGAGPSGMDLSNIISRTADRVTIS-------------------------------------- 212
            |:|||.|.||.|::..|||.||:|.:|                                      
  Rat   188 VVVIGIGNSGADVAGEISRVADQVFLSTRRGAWVWSRVWDHGNPMDASLFTRYNRAVQKFCPRYL 252

  Fly   213 ---------------------------HHLT----DIGQHSFFENVQQKPDVRELDEKGAFFVDG 246
                                       .|.|    |:..|.....|:.|.:|:......|.|.||
  Rat   253 INRQMEKKLNARFNHANFGLLPQHRILDHRTVFSDDLPSHIITGKVKIKTNVKTFTSTSAVFEDG 317

  Fly   247 SYQEFDTVFFCTGYKYAFPFLTVDSGIYVEDNYVQELYKQCINIRNPSMALIGLPFYVCAAQMM- 310
            :.:..|.|.|.||||.|||||:.|||| ::..|....|.....:..|::|.||:   |..|..: 
  Rat   318 TEENIDVVIFATGYKLAFPFLSDDSGI-LDSQYSMFKYVFPPELEKPTLAFIGI---VQPAGAII 378

  Fly   311 ---DIQARFIMSYYNGSNELPSTEDMLKDTRDRMGKLWAEGLRKRHAHMLGPKQ----------I 362
               ::|:|:::..:.|..:||..:.|:.|.           .||..|.....|.          |
  Rat   379 PTSELQSRWVVRVFTGLQKLPPKKAMMADI-----------YRKHQADKDAIKNLKDSSRRVQFI 432

  Fly   363 DYFTDLSQTAGVK-NIKPVM---TKLHNE 387
            ||..:::...||| |:..::   |||..|
  Rat   433 DYMDEIASEIGVKPNLLSLLLWDTKLAKE 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fmo-1NP_611859.1 NADB_Rossmann 5..197 CDD:304358 71/204 (35%)
NADB_Rossmann 185..>211 CDD:304358 14/25 (56%)
LOC685351XP_008767943.1 FMO-like 4..531 CDD:109787 137/484 (28%)
NADB_Rossmann 7..221 CDD:304358 79/226 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166345716
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2072
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 220 1.000 Inparanoid score I3468
OMA 1 1.010 - - QHG55225
OrthoDB 1 1.010 - - D308082at33208
OrthoFinder 1 1.000 - - FOG0000093
OrthoInspector 1 1.000 - - mtm9017
orthoMCL 1 0.900 - - OOG6_100150
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X69
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1211.710

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