DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fmo-1 and fmo2

DIOPT Version :9

Sequence 1:NP_611859.1 Gene:Fmo-1 / 37814 FlyBaseID:FBgn0034943 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_001025595.1 Gene:fmo2 / 594983 XenbaseID:XB-GENE-5849742 Length:531 Species:Xenopus tropicalis


Alignment Length:477 Identity:131/477 - (27%)
Similarity:217/477 - (45%) Gaps:113/477 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SVCIIGAGTAGLCCARHSIANGFETTVFELSDRIGGTWVYNEATGAVNGIDVHSSMYKNLRTNLP 67
            :|.:||||.:||...:..:..|.|...||.||.|||.|.:::     |..|..:|:||:|.||:.
 Frog     4 NVAVIGAGISGLVAIKSCLEEGLEPICFERSDDIGGLWRFSD-----NMEDGRASIYKSLVTNVC 63

  Fly    68 KEVMGFPDFEIGANEASYVRSDEICDFLNQYANHFDLKKHIKFDSYVIRVLQRKTKWQVLFKDLV 132
            ||:|...||.:..:..:::...:..::...||.||.|.|:|:|.:.||.| |||:.:.|..:.::
 Frog    64 KEIMCLSDFPMPEDFPNFLPHHKFFEYCRMYAEHFKLVKYIRFKTKVINV-QRKSDFSVTGQWVI 127

  Fly   133 -TN---KIEFQYFDKVLVANGHYHTPNY--SQIPNMERFKGQFLHSHDFRSREVFEGKSVLVIGA 191
             ||   |.|...||.|::..|.:..|.:  .....:::||||.:|..:::....|:||.||::|.
 Frog   128 ETNCDGKTESAIFDAVMICTGQHEQPVFPLDSFSGIKKFKGQIMHCREYKRPVGFDGKQVLIVGM 192

  Fly   192 GPSGMDLSNIISRTADRVTIS--------------------HHLT-------------------- 216
            |.||:|::..:...|.:|.:|                    |.:|                    
 Frog   193 GNSGVDIATELCTKAAKVYLSTRSGVWVLRRLGEGGYPWDLHFITRFKSWIRTTAPPSIARWLLK 257

  Fly   217 ----DIGQHSFF----ENVQQ--------------------KPDVRELDEKGAFFVDGS-YQEFD 252
                :...|.|:    |.:..                    ||.|:|..|....|.||: ....|
 Frog   258 KYMNEQFNHHFYGIQPEGIMWKEPLVNEELPSRILTGTIVIKPGVKEFTETSVCFEDGTRVDNLD 322

  Fly   253 TVFFCTGYKYAFPFLTVDSGIYVEDNYVQELYKQCI--NIRNPSMALIGL-----PFYVCAAQMM 310
            .|.|.|||:::||||  :..:...|:....|||:.|  |::.|::|:|||     |..|.|    
 Frog   323 VVIFATGYQFSFPFL--EKSVIKVDDSKGFLYKKVIPVNLQKPTLAVIGLVLPIGPIMVLA---- 381

  Fly   311 DIQARFIMSYYNGSNELPSTEDMLKD-TRD-RMGKLW---AEGLRKRHAHMLGPKQIDYFTDLSQ 370
            ::|:|:....:.|..::|:.:|..:| .|| ::.:.|   |:...:|      .:...|..||:.
 Frog   382 ELQSRWATRLFKGLIKMPTDKDKSQDLARDEKLRRKWFATAKDNSRR------TEYTKYLDDLAS 440

  Fly   371 TAGVK-NI------KPVM-TKL 384
            ..|.| ||      .||: ||:
 Frog   441 QIGAKPNIFKMFLTDPVLATKV 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fmo-1NP_611859.1 NADB_Rossmann 5..197 CDD:304358 67/197 (34%)
NADB_Rossmann 185..>211 CDD:304358 9/25 (36%)
fmo2NP_001025595.1 FMO-like 3..527 CDD:109787 131/477 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D308082at33208
OrthoFinder 1 1.000 - - FOG0000093
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X69
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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