DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fmo-1 and si:dkey-239i20.4

DIOPT Version :9

Sequence 1:NP_611859.1 Gene:Fmo-1 / 37814 FlyBaseID:FBgn0034943 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_001038299.2 Gene:si:dkey-239i20.4 / 557628 ZFINID:ZDB-GENE-030131-2644 Length:543 Species:Danio rerio


Alignment Length:480 Identity:130/480 - (27%)
Similarity:194/480 - (40%) Gaps:125/480 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VCIIGAGTAGLCCARHSIANGFETTVFELSDRIGGTWVYNEATGAVNGIDVHSSMYKNLRTNLPK 68
            |.:||||::||...:..:..|.|...||.||.|||.|.:.|....     ...|:|.:|..|..|
Zfish     5 VAVIGAGSSGLAAIKCCLDEGLEPVCFESSDDIGGLWRFREKPET-----DRCSIYHSLTVNTSK 64

  Fly    69 EVMGFPDFEIGANEASYVRSDEICDFLNQYANHFDLKKHIKFDSYVIRVLQR-----KTKWQVLF 128
            |:|.:.||.:..|..:::.:..|..:...||.||:|.:.|.|.:.|..|.||     ..:|:|:.
Zfish    65 EMMCYSDFPVPDNFPNFMHNSLIVQYYRLYAEHFNLFERIHFQTTVRSVRQRPDFSVSGQWEVVT 129

  Fly   129 KDLVTNKIEFQYFDKVLVANGHYHTP--NYSQIPNMERFKGQFLHSHDFRSREVFEGKSVLVIGA 191
            .|. ..::|...||.|||..|||..|  ..|:.|.::.|.|..:||.:::..:.:.||.||:||.
Zfish   130 ADR-DGQVETHMFDGVLVCVGHYTQPIKPLSEFPGIDTFPGTVIHSWEYKKPDQYIGKKVLIIGI 193

  Fly   192 GPSGMDLSNIISRTADRVTIS------------------------------HHLTD------IGQ 220
            |.||.|::..:|||.::..:|                              |.|..      ||:
Zfish   194 GNSGGDIAVELSRTCEKTFLSTRKGSWVIGRMVEKGLPLDMMNISRVQDLMHCLIPRALVNWIGE 258

  Fly   221 HSFFE---------------------------------NVQQKPDVRELDEKGAFFVDGSYQE-F 251
            .|..:                                 .:..||:|:........|.|||.:| .
Zfish   259 RSLNQRHDHKLYGLQPKHRILDHRPVINDDLPGRILVGELVLKPNVQTFHGSTVVFDDGSIEEKI 323

  Fly   252 DTVFFCTGYKYAFPFL------TVDSGIYVEDNYVQELYKQCI--NIRNPSMALIGL-----PFY 303
            |.|..||||.|.||||      :.|.|:        :||::..  ::..|::|:|||     |..
Zfish   324 DAVILCTGYDYKFPFLPDSLNSSADGGM--------KLYRRIFPPSLERPTLAIIGLLQTRGPIM 380

  Fly   304 VCAAQMMDIQARFIMSYYNGSNELPSTEDMLKDTRDRMGKLWAEGLRKRHAHMLGPKQIDYFTDL 368
            ..|    ::|||:......|.|.|||.|.|.|    |:.|.....|:......|...|:||.   
Zfish   381 PAA----ELQARWATRVIKGLNHLPSAEKMSK----RIEKDIKPYLKSHPCPKLASLQVDYI--- 434

  Fly   369 SQTAGVKNIKPVMTKLHNESSKCFN 393
                      |.:..:..|...|.|
Zfish   435 ----------PYLDSIAKEVGACPN 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fmo-1NP_611859.1 NADB_Rossmann 5..197 CDD:304358 67/198 (34%)
NADB_Rossmann 185..>211 CDD:304358 11/25 (44%)
si:dkey-239i20.4NP_001038299.2 FMO-like 3..530 CDD:109787 130/480 (27%)
NADB_Rossmann 6..206 CDD:304358 68/205 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2072
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55225
OrthoDB 1 1.010 - - D308082at33208
OrthoFinder 1 1.000 - - FOG0000093
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100150
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X69
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
98.730

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