DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fmo-1 and si:dkey-239i20.2

DIOPT Version :9

Sequence 1:NP_611859.1 Gene:Fmo-1 / 37814 FlyBaseID:FBgn0034943 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_001038294.1 Gene:si:dkey-239i20.2 / 557525 ZFINID:ZDB-GENE-041001-98 Length:562 Species:Danio rerio


Alignment Length:468 Identity:133/468 - (28%)
Similarity:210/468 - (44%) Gaps:106/468 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VCIIGAGTAGLCCARHSIANGFETTVFELSDRIGGTWVYNEATGAVNGIDVHSSMYKNLRTNLPK 68
            |.|||.||:||.|.:..:..|.|...||.||.|||.|.:.|..    .:| .:|:|.:|..|..|
Zfish     5 VAIIGGGTSGLACIKCCLDEGLEPVCFETSDDIGGLWRFKENP----DLD-QASIYHSLIINTSK 64

  Fly    69 EVMGFPDFEIGANEASYVRSDEICDFLNQYANHFDLKKHIKFDSYVIRVLQR-----KTKWQV-- 126
            |:|.:.|:.|.|:..:|:.:..|.::...||.:|.||:||:|.:.|:.|..|     ..:|.|  
Zfish    65 EMMCYSDYPIPAHFPNYMHNSLIMEYFRMYAENFQLKRHIRFQTRVLHVTPRPDFPHSGQWDVET 129

  Fly   127 LFKDLVTNKIEFQYFDKVLVANGHY---HTPNYSQIPNMERFKGQFLHSHDFRSREVFEGKSVLV 188
            ..||.:..|   |.||.|:|..||:   |.| ....|.::.|||:|.||.|:::.|.:.||..:|
Zfish   130 ESKDGLREK---QVFDAVMVCTGHHCHPHLP-LKDFPGIDTFKGKFFHSRDYKNPEDWRGKRAVV 190

  Fly   189 IGAGPSGMDLSNIISRTADRVTIS--------HHLTDIG-------------------------- 219
            ||.|.||.|::..:||.|.:|.:|        :.:.|.|                          
Zfish   191 IGIGNSGGDIAVELSRMAKQVYLSTRKGSWILNRVGDSGVPFDMMFNNRAVMWFLDSLPVKYRNK 255

  Fly   220 -------------------QHSFFE----------------NVQQKPDVRELDEKGAFFVDGSYQ 249
                               :|..|.                .|..||:|:|.......|.||:.:
Zfish   256 LGESRLNKRFDHKLYGLQPEHRIFSQHPMVNDDLPNRILSGTVSVKPNVQEFRGSSVVFEDGTVE 320

  Fly   250 E-FDTVFFCTGYKYAFPFLTVDSGIYVEDNYVQELYKQCI--NIRNPSMALIGLPFYVCAAQ-MM 310
            : .|.|.|.|||.::||||: ...|.|.:|.| .|||...  .:...::|:|||...:.|.. :.
Zfish   321 DNIDLVVFATGYTFSFPFLS-SHVIPVSNNKV-SLYKFVYPPGLERSTLAVIGLIQPLGAIMPIS 383

  Fly   311 DIQARFIMSYYNGSNELPSTEDMLKDTRDRMGKLWAEGLRKRHA----HMLGPKQIDYFTDLSQT 371
            ::|||:....:.|..:|||...|:||.:.:     .:.:.:|:.    |.:   |:||...:.:.
Zfish   384 EMQARWATRVFKGLCKLPSKNAMMKDIKAK-----EQAMTQRYVAAQRHTI---QVDYIPYMDEL 440

  Fly   372 AGVKNIKPVMTKL 384
            |....::|.:.:|
Zfish   441 AKQVGVRPSIPRL 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fmo-1NP_611859.1 NADB_Rossmann 5..197 CDD:304358 74/201 (37%)
NADB_Rossmann 185..>211 CDD:304358 11/25 (44%)
si:dkey-239i20.2NP_001038294.1 FMO-like 2..531 CDD:109787 133/468 (28%)
NADB_Rossmann 7..150 CDD:304358 53/150 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2072
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55225
OrthoDB 1 1.010 - - D308082at33208
OrthoFinder 1 1.000 - - FOG0000093
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100150
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X69
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
98.730

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