DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fmo-1 and fmo3

DIOPT Version :10

Sequence 1:NP_611859.1 Gene:Fmo-1 / 37814 FlyBaseID:FBgn0034943 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_001015707.1 Gene:fmo3 / 548424 XenbaseID:XB-GENE-965447 Length:534 Species:Xenopus tropicalis


Alignment Length:469 Identity:137/469 - (29%)
Similarity:205/469 - (43%) Gaps:112/469 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SVCIIGAGTAGLCCARHSIANGFETTVFELSDRIGGTWVYNEATGAVNGIDVHSSMYKNLRTNLP 67
            :|.|||||.:||...:.|:..|.|.|.||.||.|||.|.|.|.  |..|   .:|:|:::.||..
 Frog     6 NVAIIGAGISGLAALKCSLEAGLEATCFEKSDSIGGLWNYTEC--AEEG---RASIYRSVCTNAC 65

  Fly    68 KEVMGFPDFEIGANEASYVRSDEICDFLNQYANHFDLKKHIKFDSYVIRV-----LQRKTKWQVL 127
            ||:|.:|||.|.....:|:.:....::|..|..||||.::|||.:.|:||     .|...:|:|:
 Frog    66 KEMMCYPDFPIPDEFPNYMHNSWFLNYLRLYVKHFDLARYIKFKTAVVRVQKCPDFQVTGRWEVI 130

  Fly   128 FKDLVTNKIEFQYFDKVLVANGHYHTPN--YSQIPNMERFKGQFLHSHDFRSREVFEGKSVLVIG 190
            .:.  ..:.....||.||:..||:..||  .:....:|||.|:::|:.:::....:.||.|||:|
 Frog   131 TEH--DGERSSDIFDSVLICTGHHVYPNLPLNSFLGIERFTGRYMHNREYKEPLQYAGKRVLVVG 193

  Fly   191 AGPSGMDLSNIISRTADRVTIS--------HHLTDIG---------QHSFFEN------------ 226
            .|.:|.|:|..:|.||.:|.:|        ..:.|.|         ::.||.|            
 Frog   194 LGNTGADISVELSHTAQKVWLSTRSGSWIMSRVWDNGYPWDMVYLTRYHFFLNKILPRAISDYLY 258

  Fly   227 ----------------------------------------VQQKPDVRELDEKGAFFVDGSYQE- 250
                                                    |..||::||..|..|.|.|||..| 
 Frog   259 ERMMNKRFSHENYGLVPVDKGLRKEPVFNDDLAACITCGTVVVKPNIREFTETSAIFEDGSIAEN 323

  Fly   251 FDTVFFCTGYKYAFPFLTVDSGIYVEDNYVQELYKQCI--NIRNPSMALIGL-------PFYVCA 306
            .|.|.|.|||.:|:||  :|..|....|....|||...  .:..|::|:|||       |     
 Frog   324 VDVVIFATGYSFAYPF--IDDSIMKNSNNKVSLYKGVFPPKLEKPTLAVIGLLQSLGSIP----- 381

  Fly   307 AQMMDIQARFIMSYYNGSNELPSTEDMLKDTRDRMGKLWAEGLRKR----HAHMLGPKQIDYFTD 367
             ...|:|||:.:....|..:||..|.||::..:       |...|:    .:..|....|.|..:
 Frog   382 -STSDVQARWALRVLKGICKLPPKESMLQELNE-------EETEKKSWFGQSETLSTDYITYMDE 438

  Fly   368 LSQTAGVKNIKPVM 381
            ||.:.|.|...|::
 Frog   439 LSSSIGCKANLPLL 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fmo-1NP_611859.1 PLN02172 4..373 CDD:215116 134/458 (29%)
fmo3NP_001015707.1 FMO-like 5..532 CDD:395602 137/469 (29%)

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