DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fmo-1 and fmo3

DIOPT Version :9

Sequence 1:NP_611859.1 Gene:Fmo-1 / 37814 FlyBaseID:FBgn0034943 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_001015707.1 Gene:fmo3 / 548424 XenbaseID:XB-GENE-965447 Length:534 Species:Xenopus tropicalis


Alignment Length:469 Identity:137/469 - (29%)
Similarity:205/469 - (43%) Gaps:112/469 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SVCIIGAGTAGLCCARHSIANGFETTVFELSDRIGGTWVYNEATGAVNGIDVHSSMYKNLRTNLP 67
            :|.|||||.:||...:.|:..|.|.|.||.||.|||.|.|.|.  |..|   .:|:|:::.||..
 Frog     6 NVAIIGAGISGLAALKCSLEAGLEATCFEKSDSIGGLWNYTEC--AEEG---RASIYRSVCTNAC 65

  Fly    68 KEVMGFPDFEIGANEASYVRSDEICDFLNQYANHFDLKKHIKFDSYVIRV-----LQRKTKWQVL 127
            ||:|.:|||.|.....:|:.:....::|..|..||||.::|||.:.|:||     .|...:|:|:
 Frog    66 KEMMCYPDFPIPDEFPNYMHNSWFLNYLRLYVKHFDLARYIKFKTAVVRVQKCPDFQVTGRWEVI 130

  Fly   128 FKDLVTNKIEFQYFDKVLVANGHYHTPN--YSQIPNMERFKGQFLHSHDFRSREVFEGKSVLVIG 190
            .:.  ..:.....||.||:..||:..||  .:....:|||.|:::|:.:::....:.||.|||:|
 Frog   131 TEH--DGERSSDIFDSVLICTGHHVYPNLPLNSFLGIERFTGRYMHNREYKEPLQYAGKRVLVVG 193

  Fly   191 AGPSGMDLSNIISRTADRVTIS--------HHLTDIG---------QHSFFEN------------ 226
            .|.:|.|:|..:|.||.:|.:|        ..:.|.|         ::.||.|            
 Frog   194 LGNTGADISVELSHTAQKVWLSTRSGSWIMSRVWDNGYPWDMVYLTRYHFFLNKILPRAISDYLY 258

  Fly   227 ----------------------------------------VQQKPDVRELDEKGAFFVDGSYQE- 250
                                                    |..||::||..|..|.|.|||..| 
 Frog   259 ERMMNKRFSHENYGLVPVDKGLRKEPVFNDDLAACITCGTVVVKPNIREFTETSAIFEDGSIAEN 323

  Fly   251 FDTVFFCTGYKYAFPFLTVDSGIYVEDNYVQELYKQCI--NIRNPSMALIGL-------PFYVCA 306
            .|.|.|.|||.:|:||  :|..|....|....|||...  .:..|::|:|||       |     
 Frog   324 VDVVIFATGYSFAYPF--IDDSIMKNSNNKVSLYKGVFPPKLEKPTLAVIGLLQSLGSIP----- 381

  Fly   307 AQMMDIQARFIMSYYNGSNELPSTEDMLKDTRDRMGKLWAEGLRKR----HAHMLGPKQIDYFTD 367
             ...|:|||:.:....|..:||..|.||::..:       |...|:    .:..|....|.|..:
 Frog   382 -STSDVQARWALRVLKGICKLPPKESMLQELNE-------EETEKKSWFGQSETLSTDYITYMDE 438

  Fly   368 LSQTAGVKNIKPVM 381
            ||.:.|.|...|::
 Frog   439 LSSSIGCKANLPLL 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fmo-1NP_611859.1 NADB_Rossmann 5..197 CDD:304358 71/198 (36%)
NADB_Rossmann 185..>211 CDD:304358 12/25 (48%)
fmo3NP_001015707.1 K_oxygenase 5..532 CDD:330995 137/469 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55225
OrthoDB 1 1.010 - - D308082at33208
OrthoFinder 1 1.000 - - FOG0000093
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X69
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.930

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