DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fmo-1 and Fmo13

DIOPT Version :9

Sequence 1:NP_611859.1 Gene:Fmo-1 / 37814 FlyBaseID:FBgn0034943 Length:416 Species:Drosophila melanogaster
Sequence 2:XP_008767949.1 Gene:Fmo13 / 289193 RGDID:1559819 Length:536 Species:Rattus norvegicus


Alignment Length:471 Identity:135/471 - (28%)
Similarity:210/471 - (44%) Gaps:104/471 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VCIIGAGTAGL----CCARHSIANGFETTVFELSDRIGGTWVYNEATGAVNGIDVHSSMYKNLRT 64
            :.|||||.:||    ||    :..|.|.|.||.|:.|||.|.|.|.|       ....:||:|..
  Rat     6 IAIIGAGVSGLGAIKCC----LEEGLEPTCFEKSNDIGGLWRYEETT-------ERPGIYKSLTC 59

  Fly    65 NLPKEVMGFPDFEIGANEASYVRSDEICDFLNQYANHFDLKKHIKFDSYVIRVLQR-----KTKW 124
            |..||:..|.|:.|..:..:|:.:.::.::|..||.||.|.|||:|.:.|.||.:|     ..:|
  Rat    60 NTSKEMTAFSDYPIPDHYPNYMHNSKMMEYLRMYARHFGLMKHIQFQTRVCRVRKRPDFSSSGQW 124

  Fly   125 QVLFKDLVTNKIEFQYFDKVLVANGHYHTPN---YSQIPNMERFKGQFLHSHDFRSREVFEGKSV 186
            .|:.:  |..|.:...||.|:|.:|| .|..   ......:.:|:|::|||.::|..:.|.||.|
  Rat   125 DVVVE--VDGKQKTYVFDGVMVCSGH-STEKCLPLQDFAGISKFQGKYLHSWEYRHPDSFVGKRV 186

  Fly   187 LVIGAGPSGMDLSNIISRTADRVTIS--------HHLTDIG------------------------ 219
            :|||.|.||.|::..||..|::|.:|        :.:.|.|                        
  Rat   187 VVIGIGNSGADVAGEISHVAEQVFLSTRRGAWIWNRVWDNGNPLDTTLFTRYNRTIQKFYPTFLI 251

  Fly   220 ---------------------QHSFFEN----------------VQQKPDVRELDEKGAFFVDGS 247
                                 :|.|..:                |..||:|:|.....|.|.|||
  Rat   252 NRWAENKLNARFNHANYGLQAKHRFLSHQSIFSDNLPNHIITGRVLVKPNVKEFTPTSAIFEDGS 316

  Fly   248 YQEFDTVFFCTGYKYAFPFLTVDSGIYVEDNYVQELYKQCINIRNPSMALIGLPFYVCAA-QMMD 311
            .:..|.|.|.|||.::||||. ||...::..:....:.....:..|::|.||:...|.|. ...:
  Rat   317 EEIVDNVVFATGYTFSFPFLD-DSSKILDSEHTMFKFVFPPQLEMPTLAFIGILQPVGATIPTSE 380

  Fly   312 IQARFIMSYYNGSNELPSTEDMLKDTRDRMGKLWAEGLRK-RHAHMLGPKQIDYFTDLSQTAGVK 375
            :|:|::...:.|..:|||..:|:.|...|..|:..|.::. |..|.:  :.|||..:::...|||
  Rat   381 LQSRWVTRVFTGLQKLPSQSNMMADINKRKRKMEKEFVKSPRGIHRV--QYIDYMDEIASELGVK 443

  Fly   376 -NIKPVM---TKLHNE 387
             |:..:.   |||..|
  Rat   444 PNLLSLFLWDTKLAKE 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fmo-1NP_611859.1 NADB_Rossmann 5..197 CDD:304358 73/203 (36%)
NADB_Rossmann 185..>211 CDD:304358 12/25 (48%)
Fmo13XP_008767949.1 FMO-like 4..532 CDD:109787 135/471 (29%)
NADB_Rossmann 8..148 CDD:304358 54/152 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166345718
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2072
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 220 1.000 Inparanoid score I3468
OMA 1 1.010 - - QHG55225
OrthoDB 1 1.010 - - D308082at33208
OrthoFinder 1 1.000 - - FOG0000093
OrthoInspector 1 1.000 - - mtm9017
orthoMCL 1 0.900 - - OOG6_100150
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X69
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1211.710

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