DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fmo-1 and Fmo2

DIOPT Version :9

Sequence 1:NP_611859.1 Gene:Fmo-1 / 37814 FlyBaseID:FBgn0034943 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_653338.2 Gene:Fmo2 / 246245 RGDID:628600 Length:535 Species:Rattus norvegicus


Alignment Length:459 Identity:130/459 - (28%)
Similarity:207/459 - (45%) Gaps:104/459 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VCIIGAGTAGLCCARHSIANGFETTVFELSDRIGGTWVYNEATGAVNGIDVHSSMYKNLRTNLPK 68
            |.:||||.:||...:..:..|.|.|.||.::.|||.|.:.|     |..|..:|:|.::.||..|
  Rat     5 VAVIGAGVSGLISLKCCVDEGLEPTCFERTEDIGGLWRFKE-----NVEDGRASIYHSVITNTSK 64

  Fly    69 EVMGFPDFEIGANEASYVRSDEICDFLNQYANHFDLKKHIKFDSYVIRVLQR-----KTKWQVLF 128
            |:..|.||.:..:..:::.:.::.::...:|..|||.|:|:|.:.||.|.:|     ..:|.|..
  Rat    65 EMSCFSDFPMPEDFPNFLHNSKLLEYFRIFAKKFDLLKYIQFQTTVISVKKRPDFASSGQWDVYV 129

  Fly   129 KDLVTNKIEFQYFDKVLVANGHYHTPN--YSQIPNMERFKGQFLHSHDFRSREVFEGKSVLVIGA 191
            :.  ..|.:...||.|:|.:||:..|:  ....|.:|||:||:.||..::....:|||.:||:|.
  Rat   130 QS--NGKEQRAVFDAVMVCSGHHIQPHLPLKSFPGIERFQGQYFHSRQYKHPVGYEGKRILVVGI 192

  Fly   192 GPSGMDLSNIISRTADRVTIS-HH----LTDIGQ---------HSFF------------------ 224
            |.|..|:::.:|:.|.:|.:| .|    |:.|.:         |:.|                  
  Rat   193 GNSAADIASELSKRAAQVFVSTRHGSWVLSRISEDGYPWDMVFHTRFSSMLRNVLPRTVVKWMME 257

  Fly   225 ---------EN----------------------------VQQKPDVRELDEKGAFFVDGSYQE-F 251
                     ||                            ::.|..|:||.|....|.||:.:| .
  Rat   258 RQMNRWFNHENYGLVPQNKYLMKEPVLNDDLPSRLLYGAIKVKTRVKELTETAVVFEDGTVEEDV 322

  Fly   252 DTVFFCTGYKYAFPFLTVDSGIYVEDNYVQELYKQCI--NIRNPSMALIGL--------PFYVCA 306
            |.:.|.|||.::||||. ||.:.||||.| .|||...  ::..|::|.|||        |     
  Rat   323 DVIVFATGYTFSFPFLE-DSLVKVEDNKV-SLYKAMFPPHLEKPTLACIGLIQPLGSIFP----- 380

  Fly   307 AQMMDIQARFIMSYYNGSNELPSTEDMLKDTRDRMGKLWAEGLRKRHAHMLGPKQIDYFTDLSQT 371
              .:::|||:....:.|...|||...|:.|..:|..|. .:...|..:.:|....|||..:|:..
  Rat   381 --TVELQARWATRVFKGVCRLPSETTMMADIAERNEKR-IDLFGKSQSQILQTNYIDYLDELALE 442

  Fly   372 AGVK 375
            .|.|
  Rat   443 IGAK 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fmo-1NP_611859.1 NADB_Rossmann 5..197 CDD:304358 64/198 (32%)
NADB_Rossmann 185..>211 CDD:304358 9/25 (36%)
Fmo2NP_653338.2 FMO-like 3..532 CDD:109787 130/459 (28%)
NAD_binding_8 7..>58 CDD:290186 20/55 (36%)
NADB_Rossmann 78..>340 CDD:304358 67/264 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2072
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 220 1.000 Inparanoid score I3468
OMA 1 1.010 - - QHG55225
OrthoDB 1 1.010 - - D308082at33208
OrthoFinder 1 1.000 - - FOG0000093
OrthoInspector 1 1.000 - - mtm9017
orthoMCL 1 0.900 - - OOG6_100150
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X69
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.780

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