DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fmo-1 and FMO3

DIOPT Version :9

Sequence 1:NP_611859.1 Gene:Fmo-1 / 37814 FlyBaseID:FBgn0034943 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_001002294.1 Gene:FMO3 / 2328 HGNCID:3771 Length:532 Species:Homo sapiens


Alignment Length:461 Identity:132/461 - (28%)
Similarity:204/461 - (44%) Gaps:110/461 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VCIIGAGTAGLCCARHSIANGFETTVFELSDRIGGTWVYNEATGAVNGIDVHSSMYKNLRTNLPK 68
            |.|||||.:||...|..:..|.|.|.||.|:.|||.|.:::     :..:..:|:||::.:|..|
Human     5 VAIIGAGVSGLASIRSCLEEGLEPTCFEKSNDIGGLWKFSD-----HAEEGRASIYKSVFSNSSK 64

  Fly    69 EVMGFPDFEIGANEASYVRSDEICDFLNQYANHFDLKKHIKFDSYVIRVLQRKT-----KWQVLF 128
            |:|.||||....:..:::.:.:|.:::..:|...:|.|:|:|.::|..|.:...     :|    
Human    65 EMMCFPDFPFPDDFPNFMHNSKIQEYIIAFAKEKNLLKYIQFKTFVSSVNKHPDFATTGQW---- 125

  Fly   129 KDLVT---NKIEFQYFDKVLVANGHYHTPNY--SQIPNMERFKGQFLHSHDFRSREVFEGKSVLV 188
             |:.|   .|.|...||.|:|.:||:..||.  ...|.:..|||:..||.|::...||.||.|||
Human   126 -DVTTERDGKKESAVFDAVMVCSGHHVYPNLPKESFPGLNHFKGKCFHSRDYKEPGVFNGKRVLV 189

  Fly   189 IGAGPSGMDLSNIISRTADRVTISHH--------------------LTDIGQHSFFEN------- 226
            :|.|.||.|::..:||||::|.||..                    :|..|  :|.:|       
Human   190 VGLGNSGCDIATELSRTAEQVMISSRSGSWVMSRVWDNGYPWDMLLVTRFG--TFLKNNLPTAIS 252

  Fly   227 --------------------------------------------VQQKPDVRELDEKGAFFVDGS 247
                                                        |..||:|:|..|..|.|.||:
Human   253 DWLYVKQMNARFKHENYGLMPLNGVLRKEPVFNDELPASILCGIVSVKPNVKEFTETSAIFEDGT 317

  Fly   248 -YQEFDTVFFCTGYKYAFPFLTVDSGIYVEDNYVQELYKQCIN--IRNPSMALIGLPFYVCAA-Q 308
             ::..|.|.|.|||.:|:|||  |..|....|....|:|....  :...::|:||....:.|| .
Human   318 IFEGIDCVIFATGYSFAYPFL--DESIIKSRNNEIILFKGVFPPLLEKSTIAVIGFVQSLGAAIP 380

  Fly   309 MMDIQARFIMSYYNGSNELPSTEDMLKDTRDRMGKLWAEGLRKR----HAHMLGPKQIDYFTDLS 369
            .:|:|:|:......|:..|||.|||:.|..::|.|       ||    .:..:....|.|..:||
Human   381 TVDLQSRWAAQVIKGTCTLPSMEDMMNDINEKMEK-------KRKWFGKSETIQTDYIVYMDELS 438

  Fly   370 QTAGVK 375
            ...|.|
Human   439 SFIGAK 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fmo-1NP_611859.1 NADB_Rossmann 5..197 CDD:304358 68/201 (34%)
NADB_Rossmann 185..>211 CDD:304358 13/25 (52%)
FMO3NP_001002294.1 FMO-like 2..532 CDD:109787 132/461 (29%)
NAD_binding_8 7..>41 CDD:290186 17/33 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2072
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 199 1.000 Inparanoid score I3793
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55225
OrthoDB 1 1.010 - - D308082at33208
OrthoFinder 1 1.000 - - FOG0000093
OrthoInspector 1 1.000 - - mtm8542
orthoMCL 1 0.900 - - OOG6_100150
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X69
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
109.780

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