DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fmo-1 and Gm4847

DIOPT Version :9

Sequence 1:NP_611859.1 Gene:Fmo-1 / 37814 FlyBaseID:FBgn0034943 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_001157784.1 Gene:Gm4847 / 226604 MGIID:3643320 Length:537 Species:Mus musculus


Alignment Length:479 Identity:135/479 - (28%)
Similarity:215/479 - (44%) Gaps:117/479 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VCIIGAGTAGL----CCARHSIANGFETTVFELSDRIGGTWVYNEATGAVN-GIDVHSSMYKNLR 63
            :.:||||.:||    ||    :..|.|.|.||....|||.|.|.|...:.| ||      ||:|.
Mouse     6 IAVIGAGVSGLGAIKCC----LEEGLEPTCFEKKSDIGGLWKYEEIPKSGNLGI------YKSLT 60

  Fly    64 TNLPKEVMGFPDFEIGANEASYVRSDEICDFLNQYANHFDLKKHIKFDSYVIRVLQR-----KTK 123
            .|..||:..|.|:.|..:..:|:...::.::|..||.||.|.|||:|.:.|..:.:|     ..:
Mouse    61 CNTSKEMTAFSDYPIPDHYPNYMHHSKMMEYLRMYARHFGLMKHIQFQTNVCNIKKRPDFSSSGQ 125

  Fly   124 WQVLFKDLVTNKIEFQY-FDKVLVANGHYHTPNYSQIPNME---RFKGQFLHSHDFRSREVFEGK 184
            |.|:.:   |.:::..| ||.::|.:||| |..|..:.:.|   :|:|.:||:.:::..:.|.||
Mouse   126 WDVVVE---TEEMQKTYIFDGIMVCSGHY-TEKYFPLQDFEGISKFQGSYLHTWEYKHPDNFVGK 186

  Fly   185 SVLVIGAGPSGMDLSNIISRTADRVTIS--------HHLTDIGQ--------------------- 220
            .|.|||.|.||.|::..|||.||:|.:|        :.:.|.|:                     
Mouse   187 RVAVIGLGNSGADVAGEISRVADQVFLSTRQGAWIWNRVWDHGEPMDTTVFTRYNRAVQKICPRY 251

  Fly   221 ------------------------HSFFE----------------NVQQKPDVRELDEKGAFFVD 245
                                    |...|                .|:.||:|:|.....|.|.|
Mouse   252 IINRQMEKKLNGRFNHANYGLLPTHRILEQRTVLSDDLPNRIIIGKVKIKPNVKEFTSTSAIFED 316

  Fly   246 GSYQEFDTVFFCTGYKYAFPFLTVDSGIYVEDNYVQELYKQCINIRNPSMALIG--------LPF 302
            |:.:..|.|.|.||||.:||||:.|||: :::.|....|.....:..|::|.||        || 
Mouse   317 GTKENIDVVIFATGYKLSFPFLSDDSGV-LDNQYSMFKYVFPPELEKPTLAFIGILQPAGAILP- 379

  Fly   303 YVCAAQMMDIQARFIMSYYNGSNELPSTEDMLKDTRDRMGKLWAEGLRKRHAHMLGPKQIDYFTD 367
                  ..::|:|:::..:.|..:|||...|:.|...:..::.|:|.:|..........:||..:
Mouse   380 ------TSELQSRWVVHVFKGIKKLPSRRAMIADINRKNHQIMAKGSKKILQDHRRVTFVDYMDE 438

  Fly   368 LSQTAGVK-NIKPVM---TKLHNE 387
            ::...||| |:..::   |||..|
Mouse   439 IASEIGVKPNLLSLLLWDTKLAKE 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fmo-1NP_611859.1 NADB_Rossmann 5..197 CDD:304358 71/205 (35%)
NADB_Rossmann 185..>211 CDD:304358 14/25 (56%)
Gm4847NP_001157784.1 FMO-like 4..516 CDD:109787 135/479 (28%)
NAD_binding_8 8..>48 CDD:290186 19/43 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167842289
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2072
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 206 1.000 Inparanoid score I3710
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55225
OrthoDB 1 1.010 - - D308082at33208
OrthoFinder 1 1.000 - - FOG0000093
OrthoInspector 1 1.000 - - mtm8771
orthoMCL 1 0.900 - - OOG6_100150
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2115
SonicParanoid 1 1.000 - - X69
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1211.740

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