DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fmo-1 and Fmo4

DIOPT Version :9

Sequence 1:NP_611859.1 Gene:Fmo-1 / 37814 FlyBaseID:FBgn0034943 Length:416 Species:Drosophila melanogaster
Sequence 2:XP_006496836.1 Gene:Fmo4 / 226564 MGIID:2429497 Length:581 Species:Mus musculus


Alignment Length:469 Identity:112/469 - (23%)
Similarity:194/469 - (41%) Gaps:115/469 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VCIIGAGTAGLCCARHSIANGFETTVFELSDRIGGTWVYNEATGAVNGIDVHSSMYKNLRTNLPK 68
            |.:||||.:||...:..:....|.|.||.:...||.|.:.:.:.     |..:.:|::|.||:.|
Mouse    26 VAVIGAGVSGLSSIKCCLDENLEPTCFERTSDFGGLWKFADTSE-----DGMTRVYRSLVTNVCK 85

  Fly    69 EVMGFPDFEIGANEASYVRSDEICDFLNQYANHFDLKKHIKFDSYVIRVLQRKT-----KWQVLF 128
            |:..:.||....:..:::..::..|:|.::|.||.|.::|:|.:.|:.|.:|..     :|    
Mouse    86 EMSCYSDFPFREDYPNFMSHEKFWDYLREFAEHFGLLRYIRFKTTVLSVTKRPDFSETGQW---- 146

  Fly   129 KDLVT---NKIEFQYFDKVLVANGHYHTPN--YSQIPNMERFKGQFLHSHDFRSREVFEGKSVLV 188
             |:||   .|.:...||.|:|..|.:.:|:  ....|.:.:||||.|||.::|..:.|.||.:||
Mouse   147 -DVVTETEGKRDRAVFDAVMVCTGQFLSPHLPLESFPGIHKFKGQILHSQEYRIPDAFRGKRILV 210

  Fly   189 IGAGPSGMDLSNIISRTADRVTIS----------------------------------------- 212
            :|.|.:|.|::..:|..|.:|.:|                                         
Mouse   211 VGLGNTGGDIAVELSEIAAQVFLSTRTGTWVLSRSSPGGYPFNMIQTRWLNFLVRVLPSRFINWT 275

  Fly   213 --HHLTDIGQH-------------SFFEN-----------VQQKPDVRELDEKGAFFVDGSYQ-E 250
              ..:..|..|             .|..|           |..|..|::..|....|.||:.: .
Mouse   276 HERKMNKILNHENYGLSIAKGKKPKFIVNDELPTCILCGKVTMKTSVKDFTESSVIFEDGTTEAN 340

  Fly   251 FDTVFFCTGYKYAFPFLTVDSGIYVEDNYVQELYKQCI--NIRNPSMALIGLPFYVCAAQMM--D 311
            .|.|.|.|||:::|||.............:  |||:..  |:...::|:||| ..:..:.::  :
Mouse   341 IDVVIFTTGYEFSFPFFEEPLKSLCTKKII--LYKRVFPPNLERATLAIIGL-ISLNGSILVGTE 402

  Fly   312 IQARFIMSYYNGSNELPSTEDMLKDTRDRMGKLWAEGLRKRHAHMLG------PKQIDYFT---D 367
            .|||:....:.|...:|.::           ||.||..:.......|      ..::|:.|   :
Mouse   403 FQARWATRVFKGLCSIPPSQ-----------KLMAEATKTEQLIKRGVIKDTSQDKLDFITYMDE 456

  Fly   368 LSQTAGVKNIKPVM 381
            |:|..|.|...|::
Mouse   457 LTQCIGAKPSIPLL 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fmo-1NP_611859.1 NADB_Rossmann 5..197 CDD:304358 61/201 (30%)
NADB_Rossmann 185..>211 CDD:304358 9/25 (36%)
Fmo4XP_006496836.1 FMO-like 23..552 CDD:109787 112/469 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2072
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 206 1.000 Inparanoid score I3710
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55225
OrthoDB 1 1.010 - - D308082at33208
OrthoFinder 1 1.000 - - FOG0000093
OrthoInspector 1 1.000 - - mtm8771
orthoMCL 1 0.900 - - OOG6_100150
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X69
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.780

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