DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fmo-1 and fmo-2

DIOPT Version :9

Sequence 1:NP_611859.1 Gene:Fmo-1 / 37814 FlyBaseID:FBgn0034943 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_501972.1 Gene:fmo-2 / 177958 WormBaseID:WBGene00001477 Length:529 Species:Caenorhabditis elegans


Alignment Length:473 Identity:123/473 - (26%)
Similarity:201/473 - (42%) Gaps:109/473 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VCIIGAGTAGLCCARHSIANGFETTVFELSDRIGGTWVY-----NEATGAVNGIDVHSSMYKNLR 63
            |.:||||.:||...||.:..||:.|.||.||.|||.|.|     ||           ||:.|...
 Worm     6 VAVIGAGASGLPSIRHGLLYGFDVTCFEASDDIGGLWRYKSHETNE-----------SSVMKTTV 59

  Fly    64 TNLPKEVMGFPDFEIGANEASYVRSDEICDFLNQYANHFDLKKHIKFDSYVIRVLQRKT-----K 123
            .|..||:..:.||....|.|:::.::|:.::...||.|..|.||||....|:.:.:.|.     .
 Worm    60 INTSKEMTAYSDFTPQENLANFMHNNEMLNYFKSYAEHHGLMKHIKLRHRVLNIERSKNYDNDGT 124

  Fly   124 WQVLFKDLVTNKIEFQYFDKVLVANGHYHTPNYSQ-IPNMERFKGQFLHSHDFRSREVFEGKSVL 187
            |:|:::......:| :.||.|||.:||:..|::.: .|....|||:.:||||::..:.:|.|.|:
 Worm   125 WKVIYQTPEEKTLE-EIFDGVLVCSGHHAIPHWPKPFPGQNEFKGRIVHSHDYKDHKGYEDKVVV 188

  Fly   188 VIGAGPSGMDLSNIISRTADRV------------------------------------------- 209
            |:|.|.||:|::...||.|.:|                                           
 Worm   189 VVGIGNSGIDVAVEQSRIAKQVYLVTRRGTWLIPKLETRGLPFDIIMNTRFFSLYKLFPQAMLNS 253

  Fly   210 --------TISHHLTDI-GQHSFFE----------------NVQQKPDVRELDEKGAFFVDGS-Y 248
                    .|.|.|..: ..|..|.                .|:.||::::.|.....|.||: .
 Worm   254 LVEYRINQRIDHDLYGLKPAHRVFSAHPSLNDELPNRIANGTVRIKPNIKKFDGYAIHFEDGTIV 318

  Fly   249 QEFDTVFFCTGYKYAFPFLTVDSGIYVEDNYVQELYKQCINIR---NPSMALIGL--PFYVCAAQ 308
            ...|.|...||:.:.|..:.....:.|.:|.| :|:|....:.   :.|:.:|||  ||    ..
 Worm   319 PHVDEVVMSTGFSFEFNLIEHGKLVPVSENEV-DLFKYMFPVATSDHNSLCIIGLIQPF----GS 378

  Fly   309 MMDI---QAR-FIMSYYNGSNELPSTEDMLKDTRDRMGKLWAEGLRKRHAHMLGPKQIDYFTDLS 369
            :|.:   ||| |..:..:|:|.:|....|.:|..::. :..|:...|...|.:....|.|..:|:
 Worm   379 IMPVSEQQARVFFANMVSGNNLIPKKSQMSEDVLNKK-EAMAQQFVKSRRHTIQVDYIPYMDELA 442

  Fly   370 QTAGVKNIKPVMTKLHNE 387
            :..|.:  .|::..|..:
 Worm   443 ELIGCQ--VPLLRTLFTD 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fmo-1NP_611859.1 NADB_Rossmann 5..197 CDD:304358 70/202 (35%)
NADB_Rossmann 185..>211 CDD:304358 11/76 (14%)
fmo-2NP_501972.1 FMO-like 4..528 CDD:109787 123/473 (26%)
NADB_Rossmann 7..220 CDD:304358 75/224 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2072
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55225
OrthoDB 1 1.010 - - D308082at33208
OrthoFinder 1 1.000 - - FOG0000093
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100150
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2115
SonicParanoid 1 1.000 - - X69
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.760

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