DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fmo-1 and fmo5.1

DIOPT Version :9

Sequence 1:NP_611859.1 Gene:Fmo-1 / 37814 FlyBaseID:FBgn0034943 Length:416 Species:Drosophila melanogaster
Sequence 2:XP_002933817.2 Gene:fmo5.1 / 100496770 XenbaseID:XB-GENE-22063234 Length:540 Species:Xenopus tropicalis


Alignment Length:525 Identity:136/525 - (25%)
Similarity:219/525 - (41%) Gaps:142/525 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SVCIIGAGTAGLCCARHSIANGFETTVFELSDRIGGTWVYNEATGAVNGIDVHSSMYKNLRTNLP 67
            :|.::|||.:||...:..:..|.|.|.||.|:.|||.|.|.:     |..|..:|:||::..|..
 Frog     4 TVAVVGAGASGLAAIKCCVDEGLEPTCFERSEDIGGLWRYKD-----NPEDGRASIYKSVIINTS 63

  Fly    68 KEVMGFPDFEIGANEASYVRSDEICDFLNQYANHFDLKKHIKFDSYVIRVLQ-----RKTKWQV- 126
            ||:..|.||.|..:..:|:.:.:|.::...||.:|.|.|:|:|.:.|..:.:     ...:|.| 
 Frog    64 KEMSCFSDFPIPDDFPNYMHNSKIMEYFRMYAQNFSLMKYIQFKTTVCSITKSLDFPTSGQWIVT 128

  Fly   127 LFKDLVTNKIEFQYFDKVLVANGHYHTPN--YSQIPNMERFKGQFLHSHDFRSREVFEGKSVLVI 189
            :.||...||   ..||.:|:.:||:..|:  .:..|.:|.||||::||.|::..|.|:.|.||||
 Frog   129 IEKDGKQNK---SVFDSILICSGHHTFPHLPLTSFPGIETFKGQYMHSRDYKGPEDFKNKRVLVI 190

  Fly   190 GAGPSGMDLSNIISRTADRVTIS----------------------------------HHLTD--- 217
            |.|.||.|::..:||.|.:|.:|                                  ..||:   
 Frog   191 GIGNSGGDIAVELSRIAKQVFLSTRRGAWIVNRVSKNGYPLDILKSRFVYLLNKALPSSLTNYMA 255

  Fly   218 ---------------IGQHSFFE----------------NVQQKPDVRELDEKGAFFVDGSYQ-E 250
                           :..|.|:.                .|:.|.:|:|..|....|.||:.: :
 Frog   256 ENAVNQRFNHDNYGLLPTHRFYSQHPTLNDELPNRIISGQVKIKCNVKEFRENDVVFEDGTEEKD 320

  Fly   251 FDTVFFCTGYKYAFPFLTVDSGIYVEDNYVQELYKQCI--NIRNPSMALIGLPFYVCAAQ-MMDI 312
            .|.|.|.|||.::||  ..:|.:.|.:|.| .|||...  .:...::|||||...:.|.. :.::
 Frog   321 IDMVIFATGYSFSFP--CDESVLTVTENKV-SLYKYVFPPRLEKNTLALIGLIQPLGAIMPISEL 382

  Fly   313 QARFIMSYYNGSNELPSTEDMLKDTRDRMGKLWAEGLRKRHAHMLGPKQIDYFTDLSQTAGVKN- 376
            |.|.....:.|...||:.:.|:.|...:..|:....:|.:. |.:....:||..:|:...|||. 
 Frog   383 QGRLATRVFKGLVRLPAAQTMIHDVAQKRQKMECRYVRSQR-HTIQVDYVDYMDELASLLGVKPS 446

  Fly   377 -----------------------------------------------IKPVMTKLHNESSKCFNE 394
                                                           |||..|:..|:.|.  ::
 Frog   447 LFQLFMTDPKLALKVLFGPCTPYQYRLMGPGKWSGARAAIMTQHDRIIKPTKTRALNKPSG--DK 509

  Fly   395 NLLHF 399
            :||||
 Frog   510 SLLHF 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fmo-1NP_611859.1 NADB_Rossmann 5..197 CDD:304358 70/199 (35%)
NADB_Rossmann 185..>211 CDD:304358 13/25 (52%)
fmo5.1XP_002933817.2 FMO-like 3..528 CDD:395602 136/525 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55225
OrthoDB 1 1.010 - - D308082at33208
OrthoFinder 1 1.000 - - FOG0000093
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X69
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.930

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