DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fmo-1 and LOC100489408

DIOPT Version :9

Sequence 1:NP_611859.1 Gene:Fmo-1 / 37814 FlyBaseID:FBgn0034943 Length:416 Species:Drosophila melanogaster
Sequence 2:XP_012817919.2 Gene:LOC100489408 / 100489408 -ID:- Length:560 Species:Xenopus tropicalis


Alignment Length:460 Identity:124/460 - (26%)
Similarity:203/460 - (44%) Gaps:100/460 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MMSVCIIGAGTAGLCCARHSIANGFETTVFELSDRIGGTWVYNEATGAVNGIDVHSSMYKNLRTN 65
            :|.|.:||||.:||...:..:..|.|.|.||.||.|||.|.:.|  ...||   .:|:|::|.:|
 Frog    28 IMKVAVIGAGASGLTAIKCCLDEGLEPTCFERSDDIGGVWRFTE--HVENG---RASIYESLVSN 87

  Fly    66 LPKEVMGFPDFEIGANEASYVRSDEICDFLNQYANHFDLKKHIKFDSYVIRV-----LQRKTKWQ 125
            ..||:|.:.||.:.....:::...::.|:...||..|:|.|:|:|.:.|..:     .|...:|:
 Frog    88 TSKEMMCYSDFPMPDTFPNFLNHTKMMDYYRMYAETFNLLKYIQFKTLVCNIRKHPSFQSTGQWE 152

  Fly   126 V-LFKDLVTNKIEFQYFDKVLVANGHYHTPNY--SQIPNMERFKGQFLHSHDFRSREVFEGKSVL 187
            | :.||   .|.:...|:.|::..|||..|.|  ...|::::|:||:.||.||:..:.::||.||
 Frog   153 VTIDKD---GKQQTSTFNFVMICTGHYSDPYYPLDSFPSIQQFQGQYFHSRDFKRSDGYKGKKVL 214

  Fly   188 VIGAGPSGMDLSNIISRTADRVTIS--------HHLTDIG------------------------- 219
            :||.|.|..|::..:||||.:|.:|        ...:|.|                         
 Frog   215 IIGTGSSACDIAVELSRTAAQVFLSTRKGTWVTSRTSDKGYPWDACLFTRFQEWFKNKLPSSIVL 279

  Fly   220 -----------QHS-----------FFE--------------NVQQKPDVRELDEKGAFFVDGSY 248
                       ||:           |.|              :|..|..|.|:......|.|.:.
 Frog   280 WWTEKKINMWFQHANYGLQPTKSSQFRELVYNDELLSRITCGSVLVKSAVTEITATSVEFDDETT 344

  Fly   249 Q-EFDTVFFCTGYKYAFPFLTVDSGIYVEDNYVQELYKQCI--NIRNPSMALIGL-----PFYVC 305
            : :.|.|.|.|||.|.||:.  |..|...||.: .||:...  :::.|::..|||     ||...
 Frog   345 EKDIDVVIFATGYIYNFPYF--DEPIIKADNSI-NLYRNIFPASLKKPTLGFIGLIRPLGPFMSV 406

  Fly   306 AAQMMDIQARFIMSYYNGSNELPSTEDMLKDTRDRMGKLWAEGLRKRHAHMLGPKQIDYFTDLSQ 370
            |    ::|||::...:.|....|..|.::||...:.........:.:.::.|..:.|:|..:|:.
 Frog   407 A----EVQARWVTRVFKGLCNFPPQEAIMKDIAKKKENFIKRFGKPQQSNSLTMEYIEYLDELTS 467

  Fly   371 TAGVK 375
            ..|.|
 Frog   468 DIGAK 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fmo-1NP_611859.1 NADB_Rossmann 5..197 CDD:304358 67/199 (34%)
NADB_Rossmann 185..>211 CDD:304358 12/25 (48%)
LOC100489408XP_012817919.2 FMO-like 30..545 CDD:395602 123/458 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55225
OrthoDB 1 1.010 - - D308082at33208
OrthoFinder 1 1.000 - - FOG0000093
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X69
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.930

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