DRSC/TRiP Functional Genomics Resources

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Protein Alignment fzr2 and AMA1

DIOPT Version :9

Sequence 1:NP_611854.1 Gene:fzr2 / 37808 FlyBaseID:FBgn0034937 Length:451 Species:Drosophila melanogaster
Sequence 2:NP_011741.5 Gene:AMA1 / 853140 SGDID:S000003457 Length:593 Species:Saccharomyces cerevisiae


Alignment Length:462 Identity:132/462 - (28%)
Similarity:216/462 - (46%) Gaps:101/462 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 EFLDENITSLENCEQTAQVHAQTDDFRDRHNRIFGFASGSSSPVRTPF--------------ANI 111
            |.|::| .:::||                      |..||.:.:|:.|              ||.
Yeast   152 EILEKN-KAIKNC----------------------FGPGSCAEIRSTFDFSTLSPDVARYYIANS 193

  Fly   112 ---SESSQRLLSIFKRPMRRLPRR-PYKILDAPELQDDFYLNLIDWS-SKNTLAVGLGCSVYLWS 171
               |.|.||.:   :||.:|:... ||::||||.|::|||.|||.|| :.|.:.||||||||:||
Yeast   194 NARSASPQRQI---QRPAKRVKSHIPYRVLDAPCLRNDFYSNLISWSRTTNNVLVGLGCSVYIWS 255

  Fly   172 AVSGQVTRLCD--FNNEDNLITAVSWHGEGRQVAIGTQSGYVTIWDAE--------NQKQ---IN 223
            ...|.|:.|..  .:.:.:|:|.||:........:||:.|.:.::|.:        |:|:   :.
Yeast   256 EKEGAVSILDHQYLSEKRDLVTCVSFCPYNTYFIVGTKFGRILLYDQKEFFHSSNTNEKEPVFVF 320

  Fly   224 RLEEHSARVTALAW------CGNRLASGSRDRSILQRDIRNPPTHITRCLRGHKLE--------- 273
            :.|.... :..|.|      |  :...|..:.::...:|::....|....:..|||         
Yeast   321 QTESFKG-ICCLEWFKPGEIC--KFYVGEENGNVSLFEIKSLHFPIKNWSKRQKLEDENLIGLKL 382

  Fly   274 ----------VCGLQWSPSNRYLASGGSDNRLLVW-TDDWPEPIYAFD-EHKAVVKALGWSPHKS 326
                      |||:..:.....||.||:||...:| ..|..:||..|. .|||.|||:.:.|...
Yeast   383 HSTYQAQAQQVCGISLNEHANLLAVGGNDNSCSLWDISDLDKPIKKFVLPHKAAVKAIAFCPWSK 447

  Fly   327 GLLASGGGSADRCLRFWNVLTGKLVKCINTGAQISNLAWARDSRELVTTHGHAQPQ----VIAWR 387
            .|||:||||.|||::||:..||.|:..|.|..|:::|.|:...:::|.|.|....:    :..:.
Yeast   448 SLLATGGGSKDRCIKFWHTSTGTLLDEICTSGQVTSLIWSLRHKQIVATFGFGDTKNPVLITLYS 512

  Fly   388 YPSLKQMARL-SGHTQRVLHLSVSPDNESIVTGGADETLRFWTVFT-KQKISKE-------PNSV 443
            ||.|.::..: |.:..|||...:||.:.:|.....|||:||:.::. |::|..|       .:::
Yeast   513 YPKLSKLLEVRSPNPLRVLSAVISPSSMAICVATNDETIRFYELWNDKEEIINEIQESGIYGSNI 577

  Fly   444 LRLFKGI 450
            :...:||
Yeast   578 IEYMEGI 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fzr2NP_611854.1 WD40 <101..439 CDD:225201 121/402 (30%)
WD40 repeat 149..185 CDD:293791 19/38 (50%)
WD40 190..446 CDD:295369 81/306 (26%)
WD40 repeat 190..227 CDD:293791 9/47 (19%)
WD40 repeat 233..269 CDD:293791 6/41 (15%)
WD40 repeat 274..310 CDD:293791 13/36 (36%)
WD40 repeat 317..355 CDD:293791 18/37 (49%)
WD40 repeat 360..398 CDD:293791 8/42 (19%)
WD40 repeat 404..436 CDD:293791 11/32 (34%)
AMA1NP_011741.5 WD40 repeat 234..271 CDD:293791 17/36 (47%)
WD40 266..561 CDD:421866 79/297 (27%)
WD40 repeat 276..321 CDD:293791 9/44 (20%)
WD40 repeat 328..374 CDD:293791 8/47 (17%)
WD40 repeat 394..432 CDD:293791 13/37 (35%)
WD40 repeat 437..474 CDD:293791 19/36 (53%)
WD40 repeat 482..523 CDD:293791 8/40 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0305
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
32.770

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