DRSC/TRiP Functional Genomics Resources

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Protein Alignment fzr2 and CDH1

DIOPT Version :9

Sequence 1:NP_611854.1 Gene:fzr2 / 37808 FlyBaseID:FBgn0034937 Length:451 Species:Drosophila melanogaster
Sequence 2:NP_011512.1 Gene:CDH1 / 852881 SGDID:S000002971 Length:566 Species:Saccharomyces cerevisiae


Alignment Length:535 Identity:187/535 - (34%)
Similarity:265/535 - (49%) Gaps:111/535 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SEYQQRLLPGVAVGKKEDIDLRCIPTRAGNHWN-----RNFVNAPG-------DSNVYES----- 51
            |...:|..|....|.      |.||:|....:|     .:..:.|.       |...|:.     
Yeast    41 SSPSRRSRPSTVYGD------RYIPSRTDIDFNSIVSISSMASVPALNPSSTEDQVEYQKERQAH 99

  Fly    52 SVYSCLLRNEFLDENI--------TSLENCEQT-----AQVHA---------------------- 81
            ..|:.||:||...|.:        :|::..:.|     ..|||                      
Yeast   100 ETYNTLLKNELFGEMLSKDTVGSESSIDRIKNTRPSTRGNVHAENTTRHGYELERVSTPPPEAAG 164

  Fly    82 -------------------QTDD----------------FRDRHNRIFGFAS-------GSSSPV 104
                               |.|:                ::.|..|....||       .|.|||
Yeast   165 LEEFSPHSTPVTPRRLFTSQQDEITRPSSNSVRGASLLTYQQRKGRRLSAASLLQSQFFDSMSPV 229

  Fly   105 RTPFANISESSQRLLSIFKRPMRRLPRRPYKILDAPELQDDFYLNLIDWSSKNTLAVGLGCSVYL 169
            |      .:|.|.|||..|: .|::.:.||::||||.|.||||.:||||||.:.|||.||.|::|
Yeast   230 R------PDSKQLLLSPGKQ-FRQIAKVPYRVLDAPSLADDFYYSLIDWSSTDVLAVALGKSIFL 287

  Fly   170 WSAVSGQVTRLCDFNNEDNLITAVSWHGEGRQVAIGTQSGYVTIWDAENQKQINRLEEHSARVTA 234
            ....:|.|..|||..||   .|::||.|.|..:|:|..:|.|.|:|...:|.|..|..|..||..
Yeast   288 TDNNTGDVVHLCDTENE---YTSLSWIGAGSHLAVGQANGLVEIYDVMKRKCIRTLSGHIDRVAC 349

  Fly   235 LAWCGNRLASGSRDRSILQRDIRNPPTHITRCLRGHKLEVCGLQWSPSNRYLASGGSDNRLLVWT 299
            |:|..:.|.|||||..||.||:|.|.... ..:..|..|||||:|:.::..|||||:||.:.|:.
Yeast   350 LSWNNHVLTSGSRDHRILHRDVRMPDPFF-ETIESHTQEVCGLKWNVADNKLASGGNDNVVHVYE 413

  Fly   300 DDWPEPIYAFDEHKAVVKALGWSPHKSGLLASGGGSADRCLRFWNVLTGKLVKCINTGAQISNLA 364
            .....||..||||||.|||:.|||||.|:||:|||:|||.|:.|||.|...:..|::|:||.|:.
Yeast   414 GTSKSPILTFDEHKAAVKAMAWSPHKRGVLATGGGTADRRLKIWNVNTSIKMSDIDSGSQICNMV 478

  Fly   365 WARDSRELVTTHGHAQPQVIAWRYPSLKQMARLSGHTQRVLHLSVSPDNESIVTGGADETLRFWT 429
            |::::.||||:||:::..:..|...|:..:|.|.||:.|||||::|.|..::|:|..|||||:|.
Yeast   479 WSKNTNELVTSHGYSKYNLTLWDCNSMDPIAILKGHSFRVLHLTLSNDGTTVVSGAGDETLRYWK 543

  Fly   430 VFTKQKISKEPNSVL 444
            :|.|.|...:|||::
Yeast   544 LFDKPKAKVQPNSLI 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fzr2NP_611854.1 WD40 <101..439 CDD:225201 154/337 (46%)
WD40 repeat 149..185 CDD:293791 18/35 (51%)
WD40 190..446 CDD:295369 115/255 (45%)
WD40 repeat 190..227 CDD:293791 14/36 (39%)
WD40 repeat 233..269 CDD:293791 14/35 (40%)
WD40 repeat 274..310 CDD:293791 15/35 (43%)
WD40 repeat 317..355 CDD:293791 21/37 (57%)
WD40 repeat 360..398 CDD:293791 12/37 (32%)
WD40 repeat 404..436 CDD:293791 16/31 (52%)
CDH1NP_011512.1 WD40 269..543 CDD:421866 127/277 (46%)
WD40 repeat 269..300 CDD:293791 15/30 (50%)
WD40 repeat 305..342 CDD:293791 14/36 (39%)
WD40 repeat 348..383 CDD:293791 14/35 (40%)
WD40 repeat 388..424 CDD:293791 15/35 (43%)
WD40 repeat 431..467 CDD:293791 21/35 (60%)
WD40 repeat 474..512 CDD:293791 12/37 (32%)
WD40 repeat 518..544 CDD:293791 14/25 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157346541
Domainoid 1 1.000 66 1.000 Domainoid score I2375
eggNOG 1 0.900 - - E2759_KOG0305
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 341 1.000 Inparanoid score I410
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000628
OrthoInspector 1 1.000 - - otm46557
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19918
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1507
TreeFam 1 0.960 - -
109.850

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