DRSC/TRiP Functional Genomics Resources

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Protein Alignment fzr2 and Cdc20

DIOPT Version :9

Sequence 1:NP_611854.1 Gene:fzr2 / 37808 FlyBaseID:FBgn0034937 Length:451 Species:Drosophila melanogaster
Sequence 2:NP_741990.1 Gene:Cdc20 / 64515 RGDID:620477 Length:499 Species:Rattus norvegicus


Alignment Length:467 Identity:165/467 - (35%)
Similarity:251/467 - (53%) Gaps:50/467 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 PGVAVGKKEDIDLRCIPTRAGNHWNRNFVNAPGDSNVYESS-----VYSCLLRNEFLDENITSLE 71
            ||...||... .::..|::.|           ||..:.:.|     |.|.||..|...|:..:..
  Rat    56 PGRTPGKSNS-KVQTTPSKPG-----------GDRYIPQRSASQMEVASFLLSKENQPEDGGTPT 108

  Fly    72 NCEQTAQVHAQTDDFRDRHNRIFGFASGSSSPVRTPFANISESSQRLLSIF----------KRPM 126
            ..|.........:.|.....:|...   |..|...|     |..|..|.:.          ::..
  Rat   109 KKEHQKAWARNLNGFDVEEAKILRL---SGKPQNAP-----EGYQNRLKVLYSQKATPGSSRKAC 165

  Fly   127 RRLPRRPYKILDAPELQDDFYLNLIDWSSKNTLAVGLGCSVYLWSAVSGQVTRLCDFNNEDNLIT 191
            |.:|..|.:||||||:::|:||||:||||.|.|||.|..|||||:|.||.:.:|.......:.|:
  Rat   166 RYIPSLPDRILDAPEIRNDYYLNLVDWSSGNVLAVALDNSVYLWNAGSGDILQLLQMEQPGDYIS 230

  Fly   192 AVSWHGEGRQVAIGTQSGYVTIWDAENQKQINRLEEHSARVTALAWCGNRLASGSRDRSILQRDI 256
            :|:|..||..:|:||.:..|.:||.:.||::..:..|||||::|:|....|:||||...|...|:
  Rat   231 SVAWIKEGNYLAVGTSNAEVQLWDVQQQKRLRNMTSHSARVSSLSWNSYILSSGSRSGHIHHHDV 295

  Fly   257 RNPPTHITRCLRGHKLEVCGLQWSPSNRYLASGGSDNRLLVWTDDWPE----PIYAFDEHKAVVK 317
            |....|:. .|.||..|||||:|:|..|:|||||:||.:.||.....|    |:..|.:|:..||
  Rat   296 RVAEHHVA-TLSGHSQEVCGLRWAPDGRHLASGGNDNIVNVWPSGPGESGWVPLQTFTQHQGAVK 359

  Fly   318 ALGWSPHKSGLLASGGGSADRCLRFWNVLTGKLVKCINTGAQISNLAWARDSRELVTTHGHAQPQ 382
            |:.|.|.:|.:||:|||::||.:|.|||.:|..:..::..:|:.::.|:...:||::.||.||.|
  Rat   360 AVAWCPWQSNILATGGGTSDRHIRIWNVCSGACLSAVDVHSQVCSILWSPHYKELISGHGFAQNQ 424

  Fly   383 VIAWRYPSLKQMARLSGHTQRVLHLSVSPDNESIVTGGADETLRFWTVF--------TKQKISKE 439
            ::.|:||::.::|.|.|||.|||.|::|||..::.:..||||||.|..|        .::|.|..
  Rat   425 LVIWKYPTMAKVAELKGHTARVLSLTMSPDGATVASAAADETLRLWRCFELDPALRREREKASTS 489

  Fly   440 PNSVLRLFKGIR 451
            .:|::.  :|||
  Rat   490 KSSLIH--QGIR 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fzr2NP_611854.1 WD40 <101..439 CDD:225201 142/359 (40%)
WD40 repeat 149..185 CDD:293791 20/35 (57%)
WD40 190..446 CDD:295369 106/267 (40%)
WD40 repeat 190..227 CDD:293791 13/36 (36%)
WD40 repeat 233..269 CDD:293791 12/35 (34%)
WD40 repeat 274..310 CDD:293791 18/39 (46%)
WD40 repeat 317..355 CDD:293791 17/37 (46%)
WD40 repeat 360..398 CDD:293791 12/37 (32%)
WD40 repeat 404..436 CDD:293791 14/39 (36%)
Cdc20NP_741990.1 Es2 25..>99 CDD:286794 13/54 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 27..80 8/35 (23%)
WD 1 182..221 23/38 (61%)
WD40 <183..473 CDD:225201 125/290 (43%)
WD40 repeat 188..224 CDD:293791 20/35 (57%)
WD40 190..471 CDD:238121 119/281 (42%)
WD 2 224..263 13/38 (34%)
WD40 repeat 229..266 CDD:293791 13/36 (36%)
WD 3 266..303 16/36 (44%)
WD40 repeat 272..307 CDD:293791 12/35 (34%)
WD 4 307..346 20/38 (53%)
WD40 repeat 312..352 CDD:293791 18/39 (46%)
WD 5 353..395 19/41 (46%)
WD40 repeat 359..397 CDD:293791 17/37 (46%)
WD 6 397..438 12/40 (30%)
WD40 repeat 402..440 CDD:293791 12/37 (32%)
WD 7 441..480 18/38 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0305
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54440
OrthoDB 1 1.010 - - D1220675at2759
OrthoFinder 1 1.000 - - FOG0000628
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.830

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