DRSC/TRiP Functional Genomics Resources

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Protein Alignment fzr2 and cdc20

DIOPT Version :9

Sequence 1:NP_611854.1 Gene:fzr2 / 37808 FlyBaseID:FBgn0034937 Length:451 Species:Drosophila melanogaster
Sequence 2:NP_998245.2 Gene:cdc20 / 406353 ZFINID:ZDB-GENE-040426-2044 Length:496 Species:Danio rerio


Alignment Length:343 Identity:144/343 - (41%)
Similarity:209/343 - (60%) Gaps:18/343 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 SPVRTPFANISESSQRLLSIFKRPMRRLPRRPYKILDAPELQDDFYLNLIDWSSKNTLAVGLGCS 166
            |.|.||   :|....|.:|.:          |.:|||||::::||||||:||..:|.|||||...
Zfish   155 SQVPTP---VSVKKSRYISSY----------PERILDAPDIRNDFYLNLMDWGRQNVLAVGLANQ 206

  Fly   167 VYLWSAVSGQVTRLCDFNNEDNLITAVSWHGEGRQVAIGTQSGYVTIWDAENQKQINRLEEHSAR 231
            ||||.|..|.:..|....:::..|.:|||..:|..:||||....|.:||.:.||::..::.||||
Zfish   207 VYLWDAGEGDIVLLKKMEDDNEYICSVSWSKDGNFLAIGTSDCKVELWDVQYQKRLRSMDGHSAR 271

  Fly   232 VTALAWCGNRLASGSRDRSILQRDIRNPPTHITRCLRGHKLEVCGLQWSPSNRYLASGGSDNRLL 296
            |..|:|..:.|:||||...|.|.|:|....||. ...||..|||||.|||..|||||||:||.:.
Zfish   272 VGCLSWNDHILSSGSRSGLIHQHDVRVADHHIF-TFGGHTQEVCGLTWSPDGRYLASGGNDNMVY 335

  Fly   297 VW---TDDWPEPIYAFDEHKAVVKALGWSPHKSGLLASGGGSADRCLRFWNVLTGKLVKCINTGA 358
            :|   |....:.|:|..||:..||||.|.|.:..:||||||::||.:|.||..:|..:..::|.:
Zfish   336 IWPMTTGSENQAIHALSEHQGAVKALAWCPWQPNILASGGGTSDRHIRIWNASSGSCISSLDTCS 400

  Fly   359 QISNLAWARDSRELVTTHGHAQPQVIAWRYPSLKQMARLSGHTQRVLHLSVSPDNESIVTGGADE 423
            |:|:|.:|.:.:|||:.||.|..:|:.|:|||..::....||..|:|:|::|||..::.:..|||
Zfish   401 QVSSLVFAPNYKELVSGHGFAHDKVVIWKYPSFAKVTEHEGHEARILNLALSPDGSTLASIAADE 465

  Fly   424 TLRFWTVFTKQK-ISKEP 440
            |:|.|..|.|:| .:|:|
Zfish   466 TIRLWKCFEKEKDAAKKP 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fzr2NP_611854.1 WD40 <101..439 CDD:225201 142/340 (42%)
WD40 repeat 149..185 CDD:293791 17/35 (49%)
WD40 190..446 CDD:295369 110/255 (43%)
WD40 repeat 190..227 CDD:293791 14/36 (39%)
WD40 repeat 233..269 CDD:293791 13/35 (37%)
WD40 repeat 274..310 CDD:293791 20/38 (53%)
WD40 repeat 317..355 CDD:293791 17/37 (46%)
WD40 repeat 360..398 CDD:293791 14/37 (38%)
WD40 repeat 404..436 CDD:293791 14/32 (44%)
cdc20NP_998245.2 WD40 <194..484 CDD:225201 123/291 (42%)
WD40 196..471 CDD:238121 117/275 (43%)
WD40 repeat 230..267 CDD:293791 14/36 (39%)
WD40 repeat 273..308 CDD:293791 13/35 (37%)
WD40 repeat 313..352 CDD:293791 20/38 (53%)
WD40 repeat 359..397 CDD:293791 17/37 (46%)
WD40 repeat 402..440 CDD:293791 14/37 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54440
OrthoDB 1 1.010 - - D1220675at2759
OrthoFinder 1 1.000 - - FOG0000628
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.930

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