DRSC/TRiP Functional Genomics Resources

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Protein Alignment fzr2 and cort

DIOPT Version :9

Sequence 1:NP_611854.1 Gene:fzr2 / 37808 FlyBaseID:FBgn0034937 Length:451 Species:Drosophila melanogaster
Sequence 2:NP_001260144.1 Gene:cort / 33937 FlyBaseID:FBgn0000351 Length:483 Species:Drosophila melanogaster


Alignment Length:513 Identity:101/513 - (19%)
Similarity:185/513 - (36%) Gaps:170/513 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 RCIPT---RAGNHWNRNFVNAPGDSNVYESSVYSCLLRNEFLDENITS--------LENCEQTAQ 78
            |.||.   |....:|..::....:.::.|:.|            .:|:        :.|..:|  
  Fly    55 RFIPNRFERENIEFNLKYIGKRKERDILETGV------------TLTASYWRQSGFISNINRT-- 105

  Fly    79 VHAQTDDFRDRHNRIFGFASGSSSPVRTPFANISESSQRLLSIFKRPMRRLPR-RPYKILDA--- 139
                   |.....|:|.|:|...:..|....:.::|..        |..  || |||.|.:|   
  Fly   106 -------FGIGERRLFQFSSQQGTRSRVVDNDSADSDW--------PCN--PRARPYAIQNATHE 153

  Fly   140 -PELQDDFYLNLIDWSSKNTLAVGLGCSVYLWSAVSGQVTRLCDFNNEDNLI------TAVSWHG 197
             |.:......|::||||...:|:..|..|.||..:           :|..::      |::.:..
  Fly   154 MPGICSPVDYNMMDWSSGGMVAMSSGQDVMLWRNL-----------DESTMVFSVESPTSLKYSP 207

  Fly   198 EGRQVAIGTQS-GY--VTIWDAENQKQI-----NRLEEHSARVTALAWC--GNRLASGSRDRSIL 252
            :|:.:|||... .|  :.:|:..:..:.     ....:....::.:.|.  |..:..|::...|:
  Fly   208 DGKHLAIGCMDRNYPVLDLWEVRSPTEFLVSYRKLFFKSMGYISCIEWSHDGKEVICGTQCGVII 272

  Fly   253 QRDIRNPPTHITRCLRGHKLEVCGLQWSPSNRYLASGGSDNRLLVW----------------TDD 301
            .  :..|..:....||.|:..|..::::|:::|.||..:|.::.::                ..|
  Fly   273 V--LAMPTLNTLMQLREHRHTVKKMKFAPTHKYFASSDTDGKIFIFDAVLKVRLLKLDGRSIVFD 335

  Fly   302 W--------------PEPIYAFD-------------EHKAVVKALGWSPHKSGLLASGGGSADRC 339
            |              |..|:.|:             :.:.|:|.|.:|.                
  Fly   336 WHPWTGEDLAVAERSPASIFIFNIPRRQFVASYRRRDDRIVIKTLTYSK---------------- 384

  Fly   340 LRFWNVLTGKLVKCINTGAQISNLAWARDSRELVTTHGHAQPQVIAWRYPSLKQMARLSGHTQR- 403
                  :||:|:  :|        ...||..:|..    .:..|:|    ||.::..|..|..| 
  Fly   385 ------ITGELL--VN--------VIRRDDADLAV----CEILVLA----SLNRVVDLMSHQDRG 425

  Fly   404 VLHLSVSPDNESIVTGGADETLRFWTVF----------TKQKISKEPNSVLRLFKGIR 451
            .|.|..:||...|.|||.|:|...|..|          .:::.:|:..|.|.|:||||
  Fly   426 TLFLMWNPDGTKIATGGLDDTFSLWNFFPTYKREAILRKQEQKAKDKCSSLSLYKGIR 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fzr2NP_611854.1 WD40 <101..439 CDD:225201 78/412 (19%)
WD40 repeat 149..185 CDD:293791 10/35 (29%)
WD40 190..446 CDD:295369 59/325 (18%)
WD40 repeat 190..227 CDD:293791 7/50 (14%)
WD40 repeat 233..269 CDD:293791 6/37 (16%)
WD40 repeat 274..310 CDD:293791 10/65 (15%)
WD40 repeat 317..355 CDD:293791 6/37 (16%)
WD40 repeat 360..398 CDD:293791 7/37 (19%)
WD40 repeat 404..436 CDD:293791 12/41 (29%)
cortNP_001260144.1 WD40 <166..453 CDD:225201 65/339 (19%)
WD40 166..451 CDD:295369 64/337 (19%)
WD40 repeat 201..244 CDD:293791 7/42 (17%)
WD40 repeat 251..287 CDD:293791 6/37 (16%)
WD40 repeat 292..326 CDD:293791 6/33 (18%)
WD40 repeat 334..369 CDD:293791 5/34 (15%)
WD40 repeat 377..419 CDD:293791 14/81 (17%)
WD40 repeat 427..466 CDD:293791 12/38 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0305
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19918
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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