DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fzr2 and Fzr1

DIOPT Version :9

Sequence 1:NP_611854.1 Gene:fzr2 / 37808 FlyBaseID:FBgn0034937 Length:451 Species:Drosophila melanogaster
Sequence 2:NP_001101544.2 Gene:Fzr1 / 314642 RGDID:1308713 Length:493 Species:Rattus norvegicus


Alignment Length:498 Identity:232/498 - (46%)
Similarity:321/498 - (64%) Gaps:59/498 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EYQQRLLPGVAVGKKEDIDL-----------------------RCIPTRAGNHWNRNF--VN--- 41
            :|::|||..:.:..:..:..                       |.||:|||.:|:.||  :|   
  Rat     4 DYERRLLRQIIIQNENTVPCVSEMRRTLTPANSPVSSPSKHGDRFIPSRAGANWSVNFHRINENE 68

  Fly    42 -APGDS---------NVYESSVYSCLLRNEFLDENITSLENCEQTAQVHAQTDDFR-----DRHN 91
             :|..:         |..:...||.||:||.|...|..:::        .||:|.|     ..|.
  Rat    69 KSPSQNRKAKDATSDNGKDGLAYSALLKNELLGAGIEKVQD--------PQTEDRRLQPSTPEHK 125

  Fly    92 RIFGFASGS--SSPVR----TPF--ANISESSQRLLSIFKRPMRRLPRRPYKILDAPELQDDFYL 148
            .:|.::..|  |||..    :|:  :.:|..||:||...::|.|::.:.|:|:||||||||||||
  Rat   126 GLFTYSLSSKRSSPDDGNDVSPYSLSPVSNKSQKLLRSPRKPTRKISKIPFKVLDAPELQDDFYL 190

  Fly   149 NLIDWSSKNTLAVGLGCSVYLWSAVSGQVTRLCDFNNEDNLITAVSWHGEGRQVAIGTQSGYVTI 213
            ||:||||.|.|:||||..||||||.:.|||||||.:.|.:.:|:|.|...|..||:||..|:|.|
  Rat   191 NLVDWSSLNVLSVGLGTCVYLWSACTSQVTRLCDLSVEGDSVTSVGWSERGNLVAVGTHKGFVQI 255

  Fly   214 WDAENQKQINRLEEHSARVTALAWCGNRLASGSRDRSILQRDIRNPPTHITRCLRGHKLEVCGLQ 278
            |||...|:::.||.|:|||.||||..::|:||||||.|||||||.|.....|.|:||:.|||||:
  Rat   256 WDAAAGKKLSVLEGHTARVGALAWNADQLSSGSRDRMILQRDIRTPALQSERRLQGHRQEVCGLK 320

  Fly   279 WSPSNRYLASGGSDNRLLVWTDDWPEPIYAFDEHKAVVKALGWSPHKSGLLASGGGSADRCLRFW 343
            ||..::.|||||:||:||||......|:..:.||.|.|||:.||||:.||||||||:||||:|||
  Rat   321 WSTDHQLLASGGNDNKLLVWNHSSLSPVQQYTEHLAAVKAIAWSPHQHGLLASGGGTADRCIRFW 385

  Fly   344 NVLTGKLVKCINTGAQISNLAWARDSRELVTTHGHAQPQVIAWRYPSLKQMARLSGHTQRVLHLS 408
            |.|||:.::||:||:|:.||||::.:.|||:|||::|.|::.|:||||.|:|:|:||:.|||:|:
  Rat   386 NTLTGQPLQCIDTGSQVCNLAWSKHANELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLA 450

  Fly   409 VSPDNESIVTGGADETLRFWTVFTKQKISKEPNSVLRLFKGIR 451
            :|||.|:||||..|||||||.||:|.:.:||..|||.||..||
  Rat   451 MSPDGEAIVTGAGDETLRFWNVFSKTRSTKESVSVLNLFTRIR 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fzr2NP_611854.1 WD40 <101..439 CDD:225201 192/343 (56%)
WD40 repeat 149..185 CDD:293791 25/35 (71%)
WD40 190..446 CDD:295369 146/255 (57%)
WD40 repeat 190..227 CDD:293791 16/36 (44%)
WD40 repeat 233..269 CDD:293791 21/35 (60%)
WD40 repeat 274..310 CDD:293791 18/35 (51%)
WD40 repeat 317..355 CDD:293791 26/37 (70%)
WD40 repeat 360..398 CDD:293791 19/37 (51%)
WD40 repeat 404..436 CDD:293791 21/31 (68%)
Fzr1NP_001101544.2 WD40 193..471 CDD:238121 161/277 (58%)
WD40 repeat 232..269 CDD:293791 16/36 (44%)
WD40 repeat 275..311 CDD:293791 21/35 (60%)
WD40 repeat 316..352 CDD:293791 18/35 (51%)
WD40 repeat 359..397 CDD:293791 26/37 (70%)
WD40 repeat 402..440 CDD:293791 19/37 (51%)
WD40 repeat 446..487 CDD:293791 25/40 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0305
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54440
OrthoDB 1 1.010 - - D1220675at2759
OrthoFinder 1 1.000 - - FOG0000628
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19918
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1507
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
98.890

Return to query results.
Submit another query.