DRSC/TRiP Functional Genomics Resources

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Protein Alignment fzr2 and slp1

DIOPT Version :9

Sequence 1:NP_611854.1 Gene:fzr2 / 37808 FlyBaseID:FBgn0034937 Length:451 Species:Drosophila melanogaster
Sequence 2:NP_593161.1 Gene:slp1 / 2543222 PomBaseID:SPAC821.08c Length:488 Species:Schizosaccharomyces pombe


Alignment Length:489 Identity:152/489 - (31%)
Similarity:235/489 - (48%) Gaps:83/489 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 YQQRLLPGVAVGKKEDIDLRCIP-----------------------------TRAGNHWNRNFVN 41
            :||.||     |:......||.|                             :|..:..:|...:
pombe    34 HQQALL-----GRNGRSSKRCSPKSSFIRNSPKIDVVNTDWSIPLCGSPRNKSRPASRSDRFIPS 93

  Fly    42 APGDSNVYESSVYSCLLRNEFLDENITSLENC--EQTAQVHA---------QTDDFRDRHNRIFG 95
            .|..:|.:.:|:.|    :...|.:.:..|.|  :...:|.|         :..|.|.:|||   
pombe    94 RPNTANAFVNSISS----DVPFDYSESVAEACGFDLNTRVLAFKLDAPEAKKPVDLRTQHNR--- 151

  Fly    96 FASGSSSPVRTPFANISESSQRLLSIFKRPMRRLPRRPYKILDAPELQDDFYLNLIDWSSKNTLA 160
                ...||.||                 ..||....|.::||||.:.||:||||:|||:.|.:|
pombe   152 ----PQRPVVTP-----------------AKRRFNTTPERVLDAPGIIDDYYLNLLDWSNLNVVA 195

  Fly   161 VGLGCSVYLWSAVSGQVTRLCDFNNEDNLITAVSWHGEGRQVAIGTQSGYVTIWDAENQKQINRL 225
            |.|..:||:|:|.||.|:.|.: .:|...:.:|.|..:|..:::|..:|.|.|:|.|:|.::..:
pombe   196 VALERNVYVWNADSGSVSALAE-TDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTM 259

  Fly   226 EEHSARVTALAWCGNRLASGSRDRSILQRDIRNPPTHITRCLRGHKLEVCGLQWSPSNRYLASGG 290
            ..|.|||..|:|..:.|:||||..:|...|:| ...|....|:||..|||||.|......|||||
pombe   260 AGHQARVGCLSWNRHVLSSGSRSGAIHHHDVR-IANHQIGTLQGHSSEVCGLAWRSDGLQLASGG 323

  Fly   291 SDNRLLVWTDDWPEPIYAFDEHKAVVKALGWSPHKSGLLASGGGSADRCLRFWNVLTGKLVKCIN 355
            :||.:.:|......|.:....|.|.|||:.|.|.:|.|||:|||:.|:.:.|||..||..|..::
pombe   324 NDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD 388

  Fly   356 TGAQISNLAWARDSRELVTTHGHAQPQVIAWRYPS--LKQMARLSGHTQRVLHLSVSPDNESIVT 418
            .|:|:::|.|:..|:|:::|||.....:..|.|.|  |.:...:..|..|||:.::|||...:.|
pombe   389 AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILST 453

  Fly   419 GGADETLRFWTVFTKQ------KISKEPNSVLRL 446
            ..:||.|:||.|:...      .|:|.|:|.:.:
pombe   454 AASDENLKFWRVYDGDHVKRPIPITKTPSSSITI 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fzr2NP_611854.1 WD40 <101..439 CDD:225201 125/345 (36%)
WD40 repeat 149..185 CDD:293791 17/35 (49%)
WD40 190..446 CDD:295369 95/263 (36%)
WD40 repeat 190..227 CDD:293791 10/36 (28%)
WD40 repeat 233..269 CDD:293791 12/35 (34%)
WD40 repeat 274..310 CDD:293791 14/35 (40%)
WD40 repeat 317..355 CDD:293791 18/37 (49%)
WD40 repeat 360..398 CDD:293791 11/39 (28%)
WD40 repeat 404..436 CDD:293791 12/37 (32%)
slp1NP_593161.1 WD40 <164..487 CDD:225201 122/324 (38%)
WD40 202..464 CDD:295369 98/263 (37%)
WD40 repeat 225..261 CDD:293791 10/35 (29%)
WD40 repeat 266..301 CDD:293791 12/35 (34%)
WD40 repeat 309..343 CDD:293791 12/33 (36%)
WD40 repeat 349..388 CDD:293791 19/38 (50%)
WD40 repeat 393..433 CDD:293791 11/39 (28%)
WD40 repeat 439..463 CDD:293791 9/23 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0305
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54440
OrthoFinder 1 1.000 - - FOG0000628
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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