DRSC/TRiP Functional Genomics Resources

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Protein Alignment fzr2 and Cdc20b

DIOPT Version :9

Sequence 1:NP_611854.1 Gene:fzr2 / 37808 FlyBaseID:FBgn0034937 Length:451 Species:Drosophila melanogaster
Sequence 2:XP_011242961.1 Gene:Cdc20b / 238896 MGIID:3644472 Length:538 Species:Mus musculus


Alignment Length:316 Identity:104/316 - (32%)
Similarity:158/316 - (50%) Gaps:35/316 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 LQDDFYLNLIDWSSKNTLAVGLGCSVYLWSAVSGQVTRLCDFNNEDNLITAVSWHGEGRQVAIGT 206
            |::|:|||.:||||:|.:||.||.|||:|:..:.......|.:...:.:::|:|..||..:|:||
Mouse   228 LRNDYYLNTLDWSSQNLVAVALGTSVYIWNGQNHSWIENIDLSVCCHYVSSVTWMREGSCLAVGT 292

  Fly   207 QSGYVTIWDAENQKQINRLEEHSARVTALAWCGNRLASGSRDRSILQRDIRNPPTHITRCLRGHK 271
            ..|.|.:|||..:||:..|..|.:.|.||:|....|:||||...:...|:|.....:....  ||
Mouse   293 SEGEVQLWDAITKKQLRNLHGHLSVVGALSWNHCTLSSGSRLGRVHHHDVRVAQHRVGTLY--HK 355

  Fly   272 LEVCGLQWSPSNRYLASGGSDNRLLVWTDDWPE------PIYAFDEHKAV--------------- 315
            ..||.|:|||..|.|:||.:|..|.:|..| |.      |:....:..||               
Mouse   356 EAVCSLKWSPDGRLLSSGCNDGLLTIWPHD-PGAGVQGLPLKVIPQSTAVKLAFSRTPLPVLLLG 419

  Fly   316 -VKALGWSPHKSGLLASGGGSADRCLRFWNVLTGKLVKCINTGAQISNLAWARDSRELVTTHGHA 379
             ::|:.|.|.:|.:||.|||..|.||...::.|||.::..:|.:||.:|.|...::|:.|..|..
Mouse   420 TLQAMEWCPWQSEVLAVGGGVKDGCLHVLDINTGKNIQTPSTQSQICSLIWLPKTKEIATGQGAP 484

  Fly   380 QPQVIAWRYPSLKQMARLSG--HTQRVLHLSVSPDNESIVTGGADET-----LRFW 428
            :..|..|..|:|   .|..|  ..|.:.|..:...:.|:.|.|..||     |:.|
Mouse   485 KNDVALWTCPTL---FRSGGFFEKQILTHPHLRTQSVSLCTYGCPETHGILPLKCW 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fzr2NP_611854.1 WD40 <101..439 CDD:225201 104/316 (33%)
WD40 repeat 149..185 CDD:293791 15/35 (43%)
WD40 190..446 CDD:295369 85/268 (32%)
WD40 repeat 190..227 CDD:293791 15/36 (42%)
WD40 repeat 233..269 CDD:293791 10/35 (29%)
WD40 repeat 274..310 CDD:293791 16/41 (39%)
WD40 repeat 317..355 CDD:293791 15/37 (41%)
WD40 repeat 360..398 CDD:293791 11/37 (30%)
WD40 repeat 404..436 CDD:293791 8/30 (27%)
Cdc20bXP_011242961.1 WD40 212..538 CDD:225201 104/316 (33%)
WD40 repeat 236..273 CDD:293791 14/36 (39%)
WD40 repeat 277..313 CDD:293791 15/35 (43%)
WD40 repeat 318..352 CDD:293791 11/33 (33%)
WD40 repeat 359..394 CDD:293791 14/35 (40%)
WD40 repeat 423..462 CDD:293791 15/38 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0305
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1220675at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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