DRSC/TRiP Functional Genomics Resources

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Protein Alignment fzr2 and cdc20b

DIOPT Version :10

Sequence 1:NP_611854.1 Gene:fzr2 / 37808 FlyBaseID:FBgn0034937 Length:451 Species:Drosophila melanogaster
Sequence 2:XP_004910413.1 Gene:cdc20b / 100497347 XenbaseID:XB-GENE-1013871 Length:519 Species:Xenopus tropicalis


Alignment Length:292 Identity:115/292 - (39%)
Similarity:164/292 - (56%) Gaps:8/292 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 LQDDFYLNLIDWSSKNTLAVGLGCSVYLWSAVSGQVTRLCDFNNEDNLITAVSWHGEGRQVAIGT 206
            |.:|:||||:||:|:|.:|:||..:.|::|..:..||:....:.....:::|||...|..:||||
 Frog   227 LHNDYYLNLLDWNSENLVAIGLKSTAYIFSGENRTVTQKIHLSCPATYVSSVSWISSGTCLAIGT 291

  Fly   207 QSGYVTIWDAENQKQINRLEEHSARVTALAWCGNRLASGSRDRSILQRDIRNPPTHITRCLRGHK 271
            .||.|.:||.|.||::..:..|.:.|.||:|..:.|:||||...|...|:|....||...  .||
 Frog   292 SSGEVQLWDIETQKRLRNMLGHMSVVGALSWNNHILSSGSRLGHIHHHDVRIAEHHIGTL--QHK 354

  Fly   272 LEVCGLQWSPSNRYLASGGSDNRLLVWTDDWPE-----PIYAFDEHKAVVKALGWSPHKSGLLAS 331
            ..:|.|:|||....||||.||..|.:|..|..|     |:... .|...|||:.|.|..|..||.
 Frog   355 QGICSLKWSPCGNKLASGSSDGDLKIWPCDPGETKLKSPLLNM-PHPTAVKAMNWCPWLSDTLAV 418

  Fly   332 GGGSADRCLRFWNVLTGKLVKCINTGAQISNLAWARDSRELVTTHGHAQPQVIAWRYPSLKQMAR 396
            |||..|..:|.|:..:||.:...||.:||.:|.|...::||:|.||.::.|:..|:||||.:|..
 Frog   419 GGGMTDGLIRIWDTNSGKNIHSANTNSQICSLLWLPQTKELLTGHGPSRNQMTIWQYPSLLKMND 483

  Fly   397 LSGHTQRVLHLSVSPDNESIVTGGADETLRFW 428
            ..||..|||||::|||...|.:..|:.|...|
 Frog   484 YYGHKGRVLHLALSPDQRRIFSAAANGTANIW 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fzr2NP_611854.1 WD40 repeat 149..185 CDD:293791 13/35 (37%)
WD40 <159..436 CDD:441893 105/275 (38%)
WD40 repeat 190..227 CDD:293791 16/36 (44%)
WD40 repeat 233..269 CDD:293791 13/35 (37%)
WD40 repeat 274..310 CDD:293791 16/40 (40%)
WD40 repeat 317..355 CDD:293791 15/37 (41%)
WD40 repeat 360..398 CDD:293791 15/37 (41%)
WD40 repeat 404..436 CDD:293791 11/25 (44%)
cdc20bXP_004910413.1 WD40 repeat 234..270 CDD:293791 13/35 (37%)
WD40 <268..515 CDD:441893 97/249 (39%)
WD40 repeat 275..312 CDD:293791 16/36 (44%)
WD40 repeat 318..349 CDD:293791 12/30 (40%)
WD40 repeat 357..396 CDD:293791 16/38 (42%)
WD40 repeat 404..440 CDD:293791 15/35 (43%)
WD40 repeat 447..485 CDD:293791 15/37 (41%)
WD40 repeat 491..517 CDD:293791 11/25 (44%)

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