DRSC/TRiP Functional Genomics Resources

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Protein Alignment Stoml2 and hflC

DIOPT Version :10

Sequence 1:NP_611853.2 Gene:Stoml2 / 37807 FlyBaseID:FBgn0034936 Length:366 Species:Drosophila melanogaster
Sequence 2:NP_418596.1 Gene:hflC / 948697 ECOCYCID:EG10435 Length:334 Species:Escherichia coli


Alignment Length:293 Identity:75/293 - (25%)
Similarity:116/293 - (39%) Gaps:64/293 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 MCVMFVPQQEAWVVERMGRFHR-------ILDPGLNILVPVADKIKYVQSLKEIAIDVPKQSAIT 98
            |.|..|.:.|..:..|.|:..|       :.:|||:..:|..:.:|.:.:..: .:|......:|
E. coli    18 MSVFVVKEGERGITLRFGKVLRDDDNKPLVYEPGLHFKIPFIETVKMLDARIQ-TMDNQADRFVT 81

  Fly    99 SDNVTLSIDGVLYLRIID---PYKASYG--VEDPEFAITQLAQTTMRSELGKMSM-DKVFRERES 157
            .:...|.:|..:..||.|   .|.|:.|  :...|..:.:.....:|||:|::.: |.|...|..
E. coli    82 KEKKDLIVDSYIKWRISDFSRYYLATGGGDISQAEVLLKRKFSDRLRSEIGRLDVKDIVTDSRGR 146

  Fly   158 LNVSIVDSINKAS---------------------------------------EAWGIACLRYEIR 183
            |.:.:.|::|..|                                       .|.||..:...|:
E. coli   147 LTLEVRDALNSGSAGTEDEVTTPAADNAIAEAAERVTAETKGKVPVINPNSMAALGIEVVDVRIK 211

  Fly   184 DIRLPTRVHEAMQMQVEAERRKRAAILESEGVREAE-INIAEGKRKSRILASEAERQEHINKASG 247
            .|.|||.|.||:..::.|||...|....|:|..||| :........:|.|| |||||..|.:..|
E. coli   212 QINLPTEVSEAIYNRMRAEREAVARRHRSQGQEEAEKLRATADYEVTRTLA-EAERQGRIMRGEG 275

  Fly   248 EAAAIIAVADARA---------RSLLAIAKSLS 271
            :|.|....|||.:         |||.|...|.|
E. coli   276 DAEAAKLFADAFSKDPDFYAFIRSLRAYENSFS 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Stoml2NP_611853.2 HflC 41..318 CDD:440099 75/293 (26%)
hflCNP_418596.1 PRK11029 1..334 CDD:182913 75/293 (26%)

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