DRSC/TRiP Functional Genomics Resources

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Protein Alignment Stoml2 and stoml1

DIOPT Version :9

Sequence 1:NP_001261161.1 Gene:Stoml2 / 37807 FlyBaseID:FBgn0034936 Length:366 Species:Drosophila melanogaster
Sequence 2:NP_001103502.1 Gene:stoml1 / 563294 ZFINID:ZDB-GENE-070209-241 Length:410 Species:Danio rerio


Alignment Length:356 Identity:70/356 - (19%)
Similarity:124/356 - (34%) Gaps:99/356 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 FVPSLVQQDFLLAGSWIPSQSRRGKASTPINMCVMF--------------------VPQQEAWVV 54
            :||.:.|.|:        :...:|..|...|:.|.|                    ||..|..||
Zfish    49 YVPKVHQNDY--------TDKSQGLLSWLCNLIVTFLVFLFTFVTFPISGWFVLKVVPNYERVVV 105

  Fly    55 ERMGRFHRILDPGLNILVPVADKIKYVQSLKEIAIDVPKQSAITSDNVTLSIDGVLYLRIIDPYK 119
            .|:||......||:.:::|..|:.:.| .|:..|.::|.....|.|:..:|:...:..||..|..
Zfish   106 FRLGRIRPPKGPGVVLILPFIDQWQRV-DLRTRAFNIPPCKVCTKDSGLVSVGADIQFRIWSPVM 169

  Fly   120 ASYGVEDPEFAITQLAQTTMRSELGKMSMDKVFRERESLNVSIVDSINKASEAWGIACLRYEIRD 184
            :...|:|...:....||..|.:.|.|.|:.::..:|..|...:...:|:.::.||:...|.|:  
Zfish   170 SVVAVQDLNSSTRLTAQNAMMTSLSKKSLREIQTDRLKLGEHLGMDMNEMTKPWGLEVDRVEL-- 232

  Fly   185 IRLPTRVHEAMQMQVEAERRKRAAILESEGVREAEINIAEGKRKSRILASEAERQEHINKASGEA 249
                                    |||.. |||.:                          .|.:
Zfish   233 ------------------------ILEGV-VREPD--------------------------GGHS 246

  Fly   250 AAIIAVADARARSLLAIAKSLSHLDGQNAASLTLAEQYIGAFKKLAKTNNTMILPSNPGDVNGFV 314
            ..:|            :..|:..|:|.......||..::........|.:|:........|:   
Zfish   247 GPLI------------MPPSVPGLEGLTGPIQQLAMHFLSQTTASQCTQDTVSFSDELHAVS--- 296

  Fly   315 AQALAVYNHVSNSNQATKSSENVKGVGACLN 345
              :::..|.:..:.::..|.|.|..||||.:
Zfish   297 --SVSSVNELIETVRSVLSEELVHQVGACFH 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Stoml2NP_001261161.1 PHB 41..199 CDD:214581 39/177 (22%)
SPFH_paraslipin 80..188 CDD:259811 25/107 (23%)
Band_7_C 266..326 CDD:292817 9/59 (15%)
stoml1NP_001103502.1 PHB 94..232 CDD:214581 36/138 (26%)
SPFH_SLP-1 109..239 CDD:259814 34/157 (22%)
SCP2 301..405 CDD:280250 8/25 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0330
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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