DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Stoml2 and nphs2

DIOPT Version :10

Sequence 1:NP_611853.2 Gene:Stoml2 / 37807 FlyBaseID:FBgn0034936 Length:366 Species:Drosophila melanogaster
Sequence 2:NP_001018155.2 Gene:nphs2 / 557914 ZFINID:ZDB-GENE-051102-2 Length:391 Species:Danio rerio


Alignment Length:188 Identity:46/188 - (24%)
Similarity:88/188 - (46%) Gaps:11/188 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 PINM--CVMFVPQQEAWVVERMGRF--HRILDPGLNILVPVADKIKYVQSLKEIAIDVPKQSAIT 98
            ||::  ||..|.:.|..|..|:|..  .|...|||...:|..| :.::..::...:.:|....:|
Zfish   130 PISVWFCVKIVREHERAVKFRLGHLLKKRPRGPGLMFYLPFLD-VCHIVDIRLQILKIPPHMVVT 193

  Fly    99 SDNVTLSIDGVLYLRIIDP---YKASYGVEDPEFAITQLAQTTMRSELGKMSMDKVFRERESLNV 160
            .|.|...:..|.|.||.:.   |.:...:.|...|:||:   ::|..|...:.:.:..:|:.:..
Zfish   194 KDLVCTEVTAVCYYRIENVSVCYSSFASIPDVMQALTQV---SVREILAHHAFNDILLDRKRIAQ 255

  Fly   161 SIVDSINKASEAWGIACLRYEIRDIRLPTRVHEAMQMQVEAERRKRAAILESEGVREA 218
            .|..:::..:..|||...:.||.:|.||..:.....::.||.|:.:..::.:||.:.|
Zfish   256 EIQVTLDSGTCRWGIKVEKAEIEEINLPPELQHNFAVEAEARRQAQVKVIAAEGEKAA 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Stoml2NP_611853.2 HflC 41..318 CDD:440099 44/185 (24%)
nphs2NP_001018155.2 SPFH_like 134..356 CDD:473137 44/184 (24%)

Return to query results.
Submit another query.